RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ADRA1DP25100 572 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 CRADDP78560 199 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 SEPT6Q14141 434 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 CASP8Q14790 479 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 STARD3Q14849 445 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 POU6F1Q14863 301 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 QPCTQ16769 361 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 C2orf27AQ580R0 203 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 ARSIQ5FYB1 569 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 IER5LQ5T953 404 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 NLRP9Q7RTR0 991 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 AGGF1Q8N302 714 aaeCLIP16.97■□□□□ 0.31
SNX1-203ENST00000558040 CFAP36Q96G28 342 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 PPP1R16AQ96I34 528 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 KLHL32Q96NJ5 620 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 GABRG3Q99928 467 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 WDR83Q9BRX9 315 aaKnown RBP16.97■□□□□ 0.31
SNX1-203ENST00000558040 VPS37BQ9H9H4 285 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 FBRSQ9HAH7 460 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 PRSS16Q9NQE7 514 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 DKK3Q9UBP4 350 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 SOX13Q9UN79 622 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 TCAF1Q9Y4C2 921 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.97■□□□□ 0.31
SNX1-203ENST00000558040 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 FAM237BA0A1B0GVD1 139 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 TSPAN11A1L157 253 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
SNX1-203ENST00000558040 KLF8O95600 359 aaPredicted RBP16.96■□□□□ 0.31
SNX1-203ENST00000558040 CRTAMO95727 393 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 CTSLP07711 333 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 ABHD2P08910 425 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 BMP1P13497 986 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 WASP42768 502 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 CAMK2GQ13555 558 aaPredicted RBP16.96■□□□□ 0.31
SNX1-203ENST00000558040 CCINQ13939 588 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 LRRC32Q14392 662 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 FAM46CQ5VWP2 391 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 USP45Q70EL2 814 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 IGDCC3Q8IVU1 814 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 IL17RCQ8NAC3 791 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 BRSK1Q8TDC3 778 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 BLOC1S5Q8TDH9 187 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 PIH1D2Q8WWB5 315 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 KIFC1Q9BW19 673 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 TRABDQ9H4I3 376 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 LRRC4CQ9HCJ2 640 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 ZDHHC4Q9NPG8 344 aa16.96■□□□□ 0.31
SNX1-203ENST00000558040 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
SNX1-203ENST00000558040 C5orf42Q9H799 3197 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
SNX1-203ENST00000558040 A0A0J9YYE9 177 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 SHISA7A6NL88 538 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 KPNA3O00505 521 aaPredicted RBP16.95■□□□□ 0.3
SNX1-203ENST00000558040 RNF40O75150 1001 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 USP1O94782 785 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 TRBC1P01850 177 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 CHRM1P11229 460 aaPredicted RBP16.95■□□□□ 0.3
SNX1-203ENST00000558040 PAMP19021 973 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 XPAP23025 273 aaPredicted RBP16.95■□□□□ 0.3
SNX1-203ENST00000558040 STX2P32856 288 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 PDE1BQ01064 536 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 UAP1Q16222 522 aaPredicted RBP16.95■□□□□ 0.3
SNX1-203ENST00000558040 SPANXN3Q5MJ09 141 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 EOGTQ5NDL2 527 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 STEAP4Q687X5 459 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 UNC5AQ6ZN44 842 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 CAPN12Q6ZSI9 719 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 C3orf62Q6ZUJ4 267 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 GLT6D1Q7Z4J2 308 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 SYNPOQ8N3V7 929 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 GSDMBQ8TAX9 411 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 PIP4K2CQ8TBX8 421 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 VOPP1Q96AW1 172 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 MAGEE1Q9HCI5 957 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 DYRK4Q9NR20 520 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.95■□□□□ 0.35e-12■■■■■ 28.5
SNX1-203ENST00000558040 PPM1HQ9ULR3 514 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 RPS6KL1Q9Y6S9 549 aa16.95■□□□□ 0.3
SNX1-203ENST00000558040 CAPN8A6NHC0 703 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 C2orf81A6NN90 581 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 PAPSS2O95340 614 aaPredicted RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 IL1BP01584 269 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 NUDT17P0C025 328 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 HOXB2P14652 356 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 CD72P21854 359 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 ITGB7P26010 798 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 SSTR1P30872 391 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 SLC8A1P32418 973 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 STARD6P59095 220 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 MSLNQ13421 630 aaPredicted RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 SLC29A2Q14542 456 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 CRYMQ14894 314 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 TAF1AQ15573 450 aaPredicted RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 ALS2CLQ60I27 953 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 TMEM135Q86UB9 458 aa16.94■□□□□ 0.3
SNX1-203ENST00000558040 TXNDC5Q8NBS9 432 aaKnown RBP16.94■□□□□ 0.3
SNX1-203ENST00000558040 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms