RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 SLC41A1Q8IVJ1 513 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 CDKL3Q8IVW4 592 aaPredicted RBP11.6□□□□□ -0.55
CNIH1-206ENST00000557659 RAVER1Q8IY67 606 aaKnown RBP11.6□□□□□ -0.55
CNIH1-206ENST00000557659 FRMD1Q8N878 549 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 ARRDC3Q96B67 414 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 BIRC7Q96CA5 298 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 LRRC45Q96CN5 670 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 ECHDC3Q96DC8 303 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 IL12RB2Q99665 862 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 C6orf106Q9H6K1 298 aaPredicted RBP11.6□□□□□ -0.55
CNIH1-206ENST00000557659 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 TRHDEQ9UKU6 1024 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 SLC6A14Q9UN76 642 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 RPL26L1Q9UNX3 145 aaKnown RBP11.6□□□□□ -0.55
CNIH1-206ENST00000557659 JRKLQ9Y4A0 524 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 PCDHB11Q9Y5F2 797 aa11.6□□□□□ -0.55
CNIH1-206ENST00000557659 FAM47DPA6NHR8 397 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 UPK3BL1B0FP48 263 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 C10orf142B7Z368 130 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 UPK3BL2E5RIL1 263 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PRAMEF26H0Y7S4 382 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 TOR1BO14657 336 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 HTRA2O43464 458 aaPredicted RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 KIF5CO60282 957 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 DFNA5O60443 496 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 FSBPO95073 299 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PCDH8O95206 1070 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PYGMP11217 842 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ITPKAP23677 461 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 GRIA4P48058 902 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 MARCKSL1P49006 195 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PRKD1Q15139 912 aaPredicted RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 NOMO1Q15155 1222 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 TEX44Q53QW1 395 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PRR23CQ6ZRP0 262 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PARS2Q7L3T8 475 aaKnown RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ALYREFQ86V81 257 aaKnown RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 IQCHQ86VS3 1027 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 DENND6BQ8NEG7 585 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 OR6K2Q8NGY2 324 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 SNX19Q92543 992 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ALG3Q92685 438 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 EXOC2Q96KP1 924 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 SRPK1Q96SB4 655 aaKnown RBP11.59□□□□□ -0.55
CNIH1-206ENST00000557659 LGMNQ99538 433 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ADGRE3Q9BY15 652 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 CD93Q9NPY3 652 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 PHTF1Q9UMS5 762 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ZKSCAN5Q9Y2L8 839 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 ATP8A1Q9Y2Q0 1164 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 FADS3Q9Y5Q0 445 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 SHROOM3Q8TF72 1996 aa11.59□□□□□ -0.55
CNIH1-206ENST00000557659 TRAFD1O14545 582 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 AREL1O15033 823 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 IGHV4-34P06331 123 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 CYP2A6P11509 494 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 AKT2P31751 481 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 LIMK1P53667 647 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 SPEM2Q0P670 501 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 SGCGQ13326 291 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 TRIM61Q5EBN2 209 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 ARMC12Q5T9G4 340 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 NAPEPLDQ6IQ20 393 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 USP45Q70EL2 814 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 ARMCX6Q7L4S7 300 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 DCP2Q8IU60 420 aaKnown RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 HTR3CQ8WXA8 447 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 QKIQ96PU8 341 aaKnown RBP eCLIP11.58□□□□□ -0.566e-19■■■■■ 78
CNIH1-206ENST00000557659 LENG8Q96PV6 779 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 CDK15Q96Q40 435 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 SEMA3CQ99985 751 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
CNIH1-206ENST00000557659 EIF2B4Q9UI10 523 aaKnown RBP11.58□□□□□ -0.56
CNIH1-206ENST00000557659 WDFY4Q6ZS81 3184 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 RALGAPA1Q6GYQ0 2036 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 GOLGA6CA6NDK9 693 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 H7C0C1 242 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 KCNK1O00180 336 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 PSMD11O00231 422 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 MAP3K6O95382 1288 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 PIGNO95427 931 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 JCHAINP01591 159 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 GOLGA6DP0CG33 693 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 HNRNPA2B1P22626 353 aaKnown RBP11.57□□□□□ -0.56
CNIH1-206ENST00000557659 RGRP47804 291 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 ATP5OP48047 213 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
CNIH1-206ENST00000557659 TAS2R38P59533 333 aa11.57□□□□□ -0.56
CNIH1-206ENST00000557659 EIF3EP60228 445 aaKnown RBP11.57□□□□□ -0.56
CNIH1-206ENST00000557659 OTUD4Q01804 1114 aaKnown RBP11.57□□□□□ -0.56
CNIH1-206ENST00000557659 STAT4Q14765 748 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms