RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 SPASTQ9UBP0 616 aa10.85□□□□□ -0.67
HNRNPC-230ENST00000557201 IPO11Q9UI26 975 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-230ENST00000557201 DNAI1Q9UI46 699 aa10.85□□□□□ -0.67
HNRNPC-230ENST00000557201 CAPN8A6NHC0 703 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 SIGLEC16A6NMB1 481 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 KRIT1O00522 736 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 NTN3O00634 580 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 TOR1BO14657 336 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 YY2O15391 372 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 KDELR3O43731 214 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 LCA5LO95447 670 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 TIMP2P16035 220 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 ITIH2P19823 946 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 PTPN9P43378 593 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 HDAC4P56524 1084 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 GEMIN4P57678 1058 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 SNRPD1P62314 119 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 YPEL5P62699 121 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 VAC14Q08AM6 782 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 C3orf38Q5JPI3 329 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 ATXN7L2Q5T6C5 722 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 CRTC1Q6UUV9 634 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 MACC1Q6ZN28 852 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 STRADAQ7RTN6 431 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 CLEC14AQ86T13 490 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 TMEM139Q8IV31 216 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 PHACTR4Q8IZ21 702 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 CCDC185Q8N715 623 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 RXFP2Q8WXD0 754 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 ARHGEF26Q96DR7 871 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 KLHL32Q96NJ5 620 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 IL12RB2Q99665 862 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 KLC2Q9H0B6 622 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 DKK3Q9UBP4 350 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 APOBEC3BQ9UH17 382 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 MFHAS1Q9Y4C4 1052 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 ZNF462Q96JM2 2506 aa10.84□□□□□ -0.67
HNRNPC-230ENST00000557201 ANKRD62A6NC57 917 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TMCO5BA8MYB1 307 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 K7ENP7 123 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 NEMP1O14524 444 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 MUSKO15146 869 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 MMP20O60882 483 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RAMP2O60895 175 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TM7SF2O76062 418 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TMCC1O94876 653 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 GJB6O95452 261 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 CELA2BP08218 269 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 KRT3P12035 628 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TSHRP16473 764 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RBMS1P29558 406 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 MAMLD1Q13495 774 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 C1orf61Q13536 156 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 PTK2BQ14289 1009 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 POLD3Q15054 466 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 CDO1Q16878 200 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 ARL13BQ3SXY8 428 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TAF1BQ53T94 588 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 PRRT3Q5FWE3 981 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 LRRC73Q5JTD7 316 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 CCDC122Q5T0U0 273 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 PLEKHA7Q6IQ23 1121 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RWDD4Q6NW29 188 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 INO80CQ6PI98 192 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TTC7BQ86TV6 843 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RYBPQ8N488 228 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 WDR48Q8TAF3 677 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 NAT6Q93015 286 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TBC1D31Q96DN5 1066 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 EPAS1Q99814 870 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 CCDC3Q9BQI4 270 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 PARVAQ9NVD7 372 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RABGEF1Q9UJ41 708 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 EPN1Q9Y6I3 576 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 SETXQ7Z333 2677 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 RP1P56715 2156 aa10.83□□□□□ -0.68
HNRNPC-230ENST00000557201 TSPAN11A1L157 253 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 EIF3CLB5ME19 914 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 EFSO43281 561 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 SDC4P31431 198 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 CYLC1P35663 651 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 RPIAP49247 311 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 THOP1P52888 689 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 CLN3Q13286 438 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 TMEM52BQ4KMG9 183 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 INO80DQ53TQ3 878 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 LVRNQ6Q4G3 990 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 PHLDB2Q86SQ0 1253 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 LRRC8AQ8IWT6 810 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 RTL3Q8N8U3 475 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 CCDC112Q8NEF3 446 aa10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 WDR36Q8NI36 951 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-230ENST00000557201 CASKIN2Q8WXE0 1202 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms