RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ROPN1BQ9BZX4 212 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 STMN4Q9H169 189 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 SLC6A15Q9H2J7 730 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 DPEP3Q9H4B8 488 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ROPN1Q9HAT0 212 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 LRRC4Q9HBW1 653 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 STARD7Q9NQZ5 370 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 TRMT13Q9NUP7 481 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 MIOSQ9NXC5 875 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 DDX43Q9NXZ2 648 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA6AQ9NYA3 693 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RRN3Q9NYV6 651 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GRHL1Q9NZI5 618 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ASIC3Q9UHC3 531 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 PLAAQ9Y263 795 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 R3HDM2Q9Y2K5 976 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 ATP8A1Q9Y2Q0 1164 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 NEU2Q9Y3R4 380 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ASB1Q9Y576 335 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 PTCH2Q9Y6C5 1203 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CFAP69A5D8W1 941 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 H0YGN5 161 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 APOC4-APOC2K7ER74 178 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 M0QZQ0 153 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 SGK1O00141 431 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ENPP3O14638 875 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 MDM4O15151 490 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 GSTA4O15217 222 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ATP2C2O75185 946 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TCEA3O75764 348 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 GRAP2O75791 330 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 STC2O76061 302 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 PARNO95453 639 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 POMCP01189 267 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 APOC2P02655 101 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ALDH2P05091 517 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 NUDT17P0C025 328 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CCDC130P13994 396 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TCF4P15884 667 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TYMPP19971 482 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TGM2P21980 687 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 KLRC2P26717 231 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 IL1R2P27930 398 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 PTGS2P35354 604 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FLT3P36888 993 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CDK7P50613 346 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ARSEP51690 589 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TKTL1P51854 596 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ZNF135P52742 658 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 ITGA8P53708 1063 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 AIF1P55008 147 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CDH6P55285 790 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 BCAR1P56945 870 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 EIF3EP60228 445 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 GABREP78334 506 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 MRPS5P82675 430 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 MRPS21P82921 87 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 ALDH6A1Q02252 535 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 XRCC4Q13426 336 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 MORF4L2Q15014 288 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 LLGL1Q15334 1064 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TAF5Q15542 800 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ANKRD20A8PQ5CZ79 823 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 MDH1BQ5I0G3 518 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 NOMO2Q5JPE7 1267 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 AGBL2Q5U5Z8 902 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 DAB2IPQ5VWQ8 1189 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TXNRD3NBQ6F5E7 133 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FAM171BQ6P995 826 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 DARS2Q6PI48 645 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 PAQR9Q6ZVX9 377 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 PDZD4Q76G19 769 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 BEND5Q7L4P6 421 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 STRADAQ7RTN6 431 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 RTN4RL1Q86UN2 441 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 PIGZQ86VD9 579 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 HOOK3Q86VS8 718 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 SCML4Q8N228 414 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ZCCHC9Q8N567 271 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 ACTL9Q8TC94 416 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CALML6Q8TD86 181 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 FAM172AQ8WUF8 416 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 IRGQQ8WZA9 623 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 HSPH1Q92598 858 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 SEPT8Q92599 483 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 DLG3Q92796 817 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 LPPQ93052 612 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 NT5C3BQ969T7 300 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 HAUS1Q96CS2 278 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FOXRED1Q96CU9 486 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 SLC7A6OSQ96CW6 309 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 PGM2Q96G03 612 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CFAP57Q96MR6 1250 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FAM193BQ96PV7 902 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 RNF157Q96PX1 679 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FERMT1Q9BQL6 677 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 SYT15Q9BQS2 421 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms