RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TMCC1O94876 653 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FGFR1OPO95684 399 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 GLB1P16278 677 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 RHOQP17081 205 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 XPAP23025 273 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 CDH5P33151 784 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 ADRA1BP35368 520 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 MAPKAPK2P49137 400 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM52BQ4KMG9 183 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 PHF19Q5T6S3 580 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM72AQ5TYM5 149 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 MANEALQ5VSG8 457 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM72DQ6L9T8 149 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM72BQ86X60 149 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 ZNF354CQ86Y25 554 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 PTRH1Q86Y79 214 aaKnown RBP9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 SLITRK4Q8IW52 837 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 ELOA2Q8IYF1 753 aaPredicted RBP9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM71AQ8IYT1 594 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 EMC1Q8N766 993 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM46DQ8NEK8 389 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 RBM15Q96T37 977 aaKnown RBP eCLIP9.11□□□□□ -0.957e-17■■■■■ 26.9
HNRNPC-227ENST00000556897 APOOQ9BUR5 198 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 MAGEB5Q9BZ81 275 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 TTYH3Q9C0H2 523 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 MAGEH1Q9H213 219 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 SEMA6CQ9H3T2 930 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 RDH14Q9HBH5 336 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 SIX2Q9NPC8 291 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 LRIT1Q9P2V4 623 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 DKK3Q9UBP4 350 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 NEU3Q9UQ49 428 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 LRP4O75096 1905 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 SDK2Q58EX2 2172 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ZFC3H1O60293 1989 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ARHGEF17Q96PE2 2063 aaPredicted RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 GTPBP10A4D1E9 387 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 B4DGG1 531 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 INSIG1O15503 277 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 KDELR3O43731 214 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 LRIG2O94898 1065 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 PIGNO95427 931 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 IGSF6O95976 241 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TNFP01375 233 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 PCCBP05166 539 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 CCL4P13236 92 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 CYP11B1P15538 503 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 PNLIPP16233 465 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 CD82P27701 267 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 RHOAP61586 193 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 RAD51Q06609 339 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ELP6Q0PNE2 266 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ARHGEF7Q14155 803 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 UBAP2LQ14157 1087 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 C16orf72Q14CZ0 275 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 CDO1Q16878 200 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 MAP9Q49MG5 647 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 C14orf28Q4W4Y0 310 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TAF3Q5VWG9 929 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 OGFOD3Q6PK18 319 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TAF8Q7Z7C8 310 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ATL2Q8NHH9 583 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 OR1E3Q8WZA6 343 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 HMCESQ96FZ2 354 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 EXOC2Q96KP1 924 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 WDR92Q96MX6 357 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 SLC12A9Q9BXP2 914 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 EPN3Q9H201 632 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 DPEP2Q9H4A9 486 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 FGF22Q9HCT0 170 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 PCDH12Q9NPG4 1184 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 MRPL40Q9NQ50 206 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM248Q9NWD8 314 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 MFHAS1Q9Y4C4 1052 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 DGKBQ9Y6T7 804 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 NBPF19A0A087WUL8 3843 aa9.1□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM202A6NGA9 273 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 ZSCAN5CA6NGD5 496 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 STMND1H3BQB6 276 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NUDT21O43809 227 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 CPNE6O95741 557 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NTRK1P04629 796 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 PRKCGP05129 697 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 LIG3P49916 1009 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 SUOXP51687 545 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 POLE2P56282 527 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 BPIFB4P59827 614 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 RAPGEF1Q13905 1077 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 HLTFQ14527 1009 aaKnown RBP eCLIP9.09□□□□□ -0.959e-12■□□□□ 10.7
HNRNPC-227ENST00000556897 IGFBP7Q16270 282 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 UGP2Q16851 508 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms