RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 KLQ9UEF7 1012 aa17.8■□□□□ 0.44
SDR39U1-219ENST00000556523 GPR34Q9UPC5 381 aa17.8■□□□□ 0.44
SDR39U1-219ENST00000556523 MGAQ8IWI9 3026 aa17.8■□□□□ 0.44
SDR39U1-219ENST00000556523 PMS2P1A4D2B8 440 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 J3QKU1 62 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 EPHB6O15197 1021 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 INSIG1O15503 277 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 PCCBP05166 539 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 CELA2BP08218 269 aaPredicted RBP17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 PDX1P52945 283 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 AIF1P55008 147 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 SKOR1P84550 965 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 EIF3IQ13347 325 aaKnown RBP17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 ALG11Q2TAA5 492 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 WSCD2Q2TBF2 565 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 CCDC81Q6ZN84 652 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 RD3Q7Z3Z2 195 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 JAMLQ86YT9 394 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 SDR16C5Q8N3Y7 309 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 NEK11Q8NG66 645 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 SNRNP27Q8WVK2 155 aaKnown RBP17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 TSACCQ96A04 125 aaPredicted RBP17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 MCEEQ96PE7 176 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 PCDHB18PQ96TA0 734 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 PCDH12Q9NPG4 1184 aa17.79■□□□□ 0.44
SDR39U1-219ENST00000556523 FLNBO75369 2602 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 TSPAN11A1L157 253 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 SIGLEC16A6NMB1 481 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 WASH4PA8MWX3 477 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 D6RAR5 112 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 TMX2-CTNND1H3BSU7 103 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 K7ENP7 123 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 PLD2O14939 933 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 TPI1P60174 286 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 MTM1Q13496 603 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 LY6DQ14210 128 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 UGP2Q16851 508 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 CDKAL1Q5VV42 579 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 INO80CQ6PI98 192 aaPredicted RBP17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 BRAT1Q6PJG6 821 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 SASS6Q6UVJ0 657 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 MON1BQ7L1V2 547 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 UMODL1-AS1Q8N2C9 162 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 FBXO39Q8N4B4 442 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 OR6C4Q8NGE1 309 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 HCAR2Q8TDS4 363 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 TTC9Q92623 222 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 WDR92Q96MX6 357 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 APOOQ9BUR5 198 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 SUV39H2Q9H5I1 410 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 FZD10Q9ULW2 581 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 ATP8A1Q9Y2Q0 1164 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 OR1A2Q9Y585 309 aa17.78■□□□□ 0.44
SDR39U1-219ENST00000556523 LRRK1Q38SD2 2015 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 LRP4O75096 1905 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 NTN3O00634 580 aaPredicted RBP17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 RPLP0P05388 317 aaKnown RBP17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 HTR7P34969 479 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 MMP12P39900 470 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 INHBCP55103 352 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 SRP54P61011 504 aaKnown RBP17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 CLN3Q13286 438 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 INPP5AQ14642 412 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 CYTH1Q15438 398 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 KIAA1614Q5VZ46 1190 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 ZNF641Q96N77 438 aaPredicted RBP17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 TMEM74Q96NL1 305 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 TUBGCP5Q96RT8 1024 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 CNPY3Q9BT09 278 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 ATP13A3Q9H7F0 1226 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 SIK3Q9Y2K2 1263 aa17.77■□□□□ 0.44
SDR39U1-219ENST00000556523 CFAP46Q8IYW2 2715 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 CACNB4O00305 520 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 CASC3O15234 703 aaKnown RBP17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 TNFP01375 233 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 SERPINA4P29622 427 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 LIG3P49916 1009 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 RAB11FIP2Q7L804 512 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 B3GNT8Q7Z7M8 397 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 PDXPQ96GD0 296 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 CCNL2Q96S94 520 aaPredicted RBP17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 RABGEF1Q9UJ41 708 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
SDR39U1-219ENST00000556523 ANKRD36A6QL64 1941 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 ARHGAP42A6NI28 874 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 PRAMEF11O60813 436 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 JMJD7P0C870 316 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 KELP23276 732 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 UGT1A5P35504 534 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 NDST2P52849 883 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 COPB1P53618 953 aaKnown RBP17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 CCL7P80098 99 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 CCNJLQ8IV13 435 aa17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 CELF6Q96J87 481 aaKnown RBP17.75■□□□□ 0.43
SDR39U1-219ENST00000556523 AGPAT1Q99943 283 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms