RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 HOXC11O43248 304 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 BMP10O95393 424 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RARBP10826 455 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 VAV1P15498 845 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PTPN1P18031 435 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TAC1P20366 129 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RPA3P35244 121 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KRT6CP48668 564 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SLC18A1P54219 525 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RNASELQ05823 741 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MYLK3Q32MK0 819 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CDONQ4KMG0 1287 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 STXBP5Q5T5C0 1151 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 C6orf163Q5TEZ5 329 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FYB2Q5VWT5 728 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CD300LGQ6UXG3 332 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SH2D5Q6ZV89 423 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PDIK1LQ8N165 341 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TEX47Q8TBZ9 253 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 UCMAQ8WVF2 138 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KCTD13Q8WZ19 329 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 EXT2Q93063 718 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NXPE3Q969Y0 559 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PCED1BQ96HM7 432 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SENP8Q96LD8 212 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TMEM237Q96Q45 408 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TUBGCP5Q96RT8 1024 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KCNK16Q96T55 309 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NPY6RQ99463 290 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RTP3Q9BQQ7 232 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM56Q9BRZ2 755 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MTG1Q9BT17 334 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRABDQ9H4I3 376 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DHX35Q9H5Z1 703 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 C12orf10Q9HB07 376 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FANCEQ9HB96 536 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 POPDC2Q9HBU9 364 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ALG13Q9NP73 1137 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KCNK9Q9NPC2 374 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 RAB6BQ9NRW1 208 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PSMC3IPQ9P2W1 217 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FZD10Q9ULW2 581 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRIM33Q9UPN9 1127 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TDRKHQ9Y2W6 561 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TIMM13Q9Y5L4 95 aaPredicted RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TRPV2Q9Y5S1 764 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TLL2Q9Y6L7 1015 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DOCK4Q8N1I0 1966 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NYNRINQ9P2P1 1898 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 C1orf232A0A0U1RR37 186 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MYBPHLA2RUH7 354 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 OR6C74A6NCV1 312 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 HHLA1C9JL84 531 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ENPP3O14638 875 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DAB1O75553 588 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ALOX12P18054 663 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ETV5P41161 510 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MGAT5Q09328 741 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ITIH4Q14624 930 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 MLC1Q15049 377 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PON2Q15165 354 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SLC1A5Q15758 541 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 UPP1Q16831 310 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 KCNT2Q6UVM3 1135 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PRPF39Q86UA1 669 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TP53INP2Q8IXH6 220 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 NETO2Q8NC67 525 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 FBXO30Q8TB52 745 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ADAMTS19Q8TE59 1207 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 TBATAQ96M53 351 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SLC2A13Q96QE2 648 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SMOQ99835 787 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ELAC2Q9BQ52 826 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 BBS2Q9BXC9 721 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ETNK1Q9HBU6 452 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ZFYVE28Q9HCC9 887 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 ARHGEF4Q9NR80 690 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 SEMA3GQ9NS98 782 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PIGVQ9NUD9 493 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 DDX43Q9NXZ2 648 aaKnown RBP5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PAK5Q9P286 719 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 PRKAG3Q9UGI9 489 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 CDH23Q9H251 3354 aa5.14□□□□□ -1.59
TMEM260-210ENST00000556422 GREB1Q4ZG55 1949 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CCDC78A2IDD5 438 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 YJEFN3A6XGL0 299 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 E7ENQ6 273 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MFSD11O43934 449 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MGRN1O60291 552 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ZBED1O96006 694 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 KRT6AP02538 564 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 KRT6BP04259 564 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GSTA2P09210 222 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 AMPD1P23109 780 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HOXC12P31275 282 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 NUP62P37198 522 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GRIA1P42261 906 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FLT3LGP49771 235 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SCNN1GP51170 649 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TKTL1P51854 596 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms