RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SLC18A2Q05940 514 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 TMEM154Q6P9G4 183 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 FAM83HQ6ZRV2 1179 aaPredicted RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 SZRD1Q7Z422 152 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 UBE2Q1Q7Z7E8 422 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 SERPINA11Q86U17 422 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 TMC8Q8IU68 726 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 RBMXL3Q8N7X1 1067 aaKnown RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 OR4N2Q8NGD1 307 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 NEK9Q8TD19 979 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 PSPC1Q8WXF1 523 aaKnown RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 EME1Q96AY2 570 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 LYZL4Q96KX0 146 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 MAK16Q9BXY0 300 aaKnown RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 GLIS2Q9BZE0 524 aaPredicted RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 POLR1BQ9H9Y6 1135 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 SCPEP1Q9HB40 452 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 SMYD2Q9NRG4 433 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 ANKEF1Q9NU02 776 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 AGO2Q9UKV8 859 aaKnown RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 PCDHGB4Q9UN71 923 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 TMEM5Q9Y2B1 443 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 CARD8Q9Y2G2 431 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 RPS6KL1Q9Y6S9 549 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 LY6G6EA0A0G2JKS1 128 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CBY3A6NI87 242 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CD8B2A6NJW9 211 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 PAGE4O60829 102 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 ATP2C2O75185 946 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CSH1P0DML2 217 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CSH2P0DML3 217 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 UNGP13051 313 aaPredicted RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 CDH2P19022 906 aaPredicted RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 TM4SF1P30408 202 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 KRT20P35900 424 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CLDN2P57739 230 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 ID2Q02363 134 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 CEBPZQ03701 1054 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 CSTF3Q12996 717 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 ACVR2BQ13705 512 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 RBMS2Q15434 407 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 TMCO3Q6UWJ1 677 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 GALNT5Q7Z7M9 940 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 ARHGAP12Q8IWW6 846 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 DHX40Q8IX18 779 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 ZCCHC9Q8N567 271 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 HORMAD2Q8N7B1 307 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 RNF183Q96D59 192 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 PABPC5Q96DU9 382 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 STRA6Q9BX79 667 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 KIF9Q9HAQ2 790 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 PNRC2Q9NPJ4 139 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 SLC6A13Q9NSD5 602 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 SPATS2LQ9NUQ6 558 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 DLGAP2Q9P1A6 1054 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 RPS6KA6Q9UK32 745 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 AAR2Q9Y312 384 aaKnown RBP5.58□□□□□ -1.52
VRK1-205ENST00000555402 ADAM18Q9Y3Q7 739 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 SLC4A4Q9Y6R1 1079 aa5.58□□□□□ -1.52
VRK1-205ENST00000555402 IFNL4K9M1U5 179 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 EBAG9O00559 213 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 SEC14L5O43304 696 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 IPO7O95373 1038 aaKnown RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 MT-CYBP00156 380 aaPredicted RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 CLTBP09497 229 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 CTSAP10619 480 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 TFPIP10646 304 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 PRF1P14222 555 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 CTPS1P17812 591 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 PSMB10P40306 273 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 PIP4K2AP48426 406 aaPredicted RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 CENPAP49450 140 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 HDAC4P56524 1084 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 HYAL1Q12794 435 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 ITGADQ13349 1161 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 FGFBP1Q14512 234 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 SMTNL2Q2TAL5 461 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 COL28A1Q2UY09 1125 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 DUSP28Q4G0W2 176 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 C6orf10Q5SRN2 563 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 GKAP1Q5VSY0 366 aaPredicted RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 LRRC8EQ6NSJ5 796 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 SARM1Q6SZW1 724 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 USP43Q70EL4 1123 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 KDELC2Q7Z4H8 507 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.57□□□□□ -1.52
VRK1-205ENST00000555402 FAM217AQ8IXS0 508 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 C1orf131Q8NDD1 294 aaKnown RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 JAKMIP2Q96AA8 810 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 MMABQ96EY8 250 aaPredicted RBP5.57□□□□□ -1.52
VRK1-205ENST00000555402 SIGLEC11Q96RL6 698 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 YME1L1Q96TA2 773 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 NCAPGQ9BPX3 1015 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 LHPPQ9H008 270 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 BPIFA1Q9NP55 256 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 SPAG4Q9NPE6 437 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 ASAH2Q9NR71 780 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 THSD1Q9NS62 852 aa5.57□□□□□ -1.52
VRK1-205ENST00000555402 RNF146Q9NTX7 359 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms