RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 OTUD4Q01804 1114 aaKnown RBP20.69■□□□□ 0.9
FOXN3-209ENST00000555353 CCNG2Q16589 344 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 LRRC73Q5JTD7 316 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 ZNF572Q7Z3I7 529 aaPredicted RBP20.69■□□□□ 0.9
FOXN3-209ENST00000555353 ACTL9Q8TC94 416 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 SEMA3CQ99985 751 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 NOD2Q9HC29 1040 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 CAPN10Q9HC96 672 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 TM9SF3Q9HD45 589 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 KNL1Q8NG31 2342 aa20.69■□□□□ 0.9
FOXN3-209ENST00000555353 TSPAN11A1L157 253 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 UPK3BL1B0FP48 263 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 UPK3BL2E5RIL1 263 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ZNF189O75820 626 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 JCHAINP01591 159 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SYPP08247 313 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 TIMP2P16035 220 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 CES1P23141 567 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 RPS21P63220 83 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 RACK1P63244 317 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ARHGAP8P85298 464 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 NOMO1Q15155 1222 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 TEAD4Q15561 434 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 UGP2Q16851 508 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 KIAA1161Q6NSJ0 714 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SPATA4Q8NEY3 305 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 TFB1MQ8WVM0 346 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ORAI3Q9BRQ5 295 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 EDEM2Q9BV94 578 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 EBF2Q9HAK2 575 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 AASDHPPTQ9NRN7 309 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SEPT10Q9P0V9 454 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 DMTF1Q9Y222 760 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ITM2BQ9Y287 266 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SLCO1B1Q9Y6L6 691 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 AREL1O15033 823 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SOCS5O75159 536 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ATXN3P54252 364 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 POLR2LP62875 67 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 IFI35P80217 286 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ELP6Q0PNE2 266 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 XRCC4Q13426 336 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SIX1Q15475 284 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SEL1L3Q68CR1 1132 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ERAP2Q6P179 960 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ZC3H18Q86VM9 953 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 PRELID2Q8N945 189 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 PDCD6IPQ8WUM4 868 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 MAGOHBQ96A72 148 aaKnown RBP20.68■□□□□ 0.9
FOXN3-209ENST00000555353 ECHDC3Q96DC8 303 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 SLC6A18Q96N87 628 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 RUNDC3BQ96NL0 473 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 FERMT1Q9BQL6 677 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 CARD6Q9BX69 1037 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 RXFP3Q9NSD7 469 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 PCDHGC4Q9Y5F7 938 aa20.68■□□□□ 0.9
FOXN3-209ENST00000555353 DMXL1Q9Y485 3027 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 CEP250Q9BV73 2442 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 A0A1W2PQ67 120 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 TRAFD1O14545 582 aaPredicted RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 SLC31A1O15431 190 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 GDF9O60383 454 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 PHF2O75151 1096 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 HLA-DQB2P05538 268 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 ENGP17813 658 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 GRIA4P48058 902 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 CSNK1EP49674 416 aaKnown RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 EIF3EP60228 445 aaKnown RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 CYP1B1Q16678 543 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 ZNF284Q2VY69 593 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 DRICH1Q6PGQ1 229 aaPredicted RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 B4GALNT4Q76KP1 1039 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 C1orf54Q8WWF1 131 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 KLK6Q92876 244 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 IL12RB2Q99665 862 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 FSCN3Q9NQT6 498 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 FEZ2Q9UHY8 353 aaPredicted RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 GGT7Q9UJ14 662 aa20.67■□□□□ 0.9
FOXN3-209ENST00000555353 ZFR2Q9UPR6 939 aaKnown RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 R3HDM2Q9Y2K5 976 aaKnown RBP20.67■□□□□ 0.9
FOXN3-209ENST00000555353 PCDH15Q96QU1 1955 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 HACD1B0YJ81 288 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 H7C0C1 242 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ARHGAP33O14559 1287 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ATP5OP48047 213 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 DSC2Q02487 901 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ZBTB17Q13105 803 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 PRKD1Q15139 912 aaPredicted RBP20.66■□□□□ 0.9
FOXN3-209ENST00000555353 TMEM259Q4ZIN3 620 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 SLC45A4Q5BKX6 768 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ALG1LQ6GMV1 187 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 NAPEPLDQ6IQ20 393 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ZSWIM9Q86XI8 627 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 CDKL3Q8IVW4 592 aaPredicted RBP20.66■□□□□ 0.9
FOXN3-209ENST00000555353 CXorf40AQ8TE69 158 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ATG4AQ8WYN0 398 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 SKA1Q96BD8 255 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms