RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TRHDEQ9UKU6 1024 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 SARDHQ9UL12 918 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 TPX2Q9ULW0 747 aaKnown RBP11.01□□□□□ -0.65
SHMT2-218ENST00000555213 R4GN57 208 aa11.01□□□□□ -0.65
SHMT2-218ENST00000555213 MEI4A8MW99 385 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 MUSKO15146 869 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 PIGNO95427 931 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 SEMA4FO95754 770 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 IFNB1P01574 187 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 SERPINF2P08697 491 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ADRB3P13945 408 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 CR2P20023 1033 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 GKP32189 559 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 MAGEA6P43360 314 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 RGRP47804 291 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 SUOXP51687 545 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ADPRHP54922 357 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 POLR2LP62875 67 aaKnown RBP11□□□□□ -0.65
SHMT2-218ENST00000555213 CNTN1Q12860 1018 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 TEX44Q53QW1 395 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ANKRD22Q5VYY1 191 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ERAP2Q6P179 960 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 NCEH1Q6PIU2 408 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11□□□□□ -0.65
SHMT2-218ENST00000555213 NDUFAF2Q8N183 169 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 PGBD5Q8N414 524 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11□□□□□ -0.65
SHMT2-218ENST00000555213 FAM160A2Q8N612 972 aaPredicted RBP11□□□□□ -0.65
SHMT2-218ENST00000555213 CNTD1Q8N815 330 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 NAT8LQ8N9F0 302 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 OR14C36Q8NHC7 312 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 CCDC110Q8TBZ0 833 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 HCAR2Q8TDS4 363 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 FOXJ1Q92949 421 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ARRDC3Q96B67 414 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 LRRC45Q96CN5 670 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ZNF419Q96HQ0 510 aaPredicted RBP11□□□□□ -0.65
SHMT2-218ENST00000555213 KLHL32Q96NJ5 620 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 GORASP1Q9BQQ3 440 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 CEP41Q9BYV8 373 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 EPB41L4BQ9H329 900 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 KDM4CQ9H3R0 1056 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 SUV39H2Q9H5I1 410 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 NOD2Q9HC29 1040 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 PREBQ9HCU5 417 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 DKK3Q9UBP4 350 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ASIC3Q9UHC3 531 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ANAPC5Q9UJX4 755 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 INVSQ9Y283 1065 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 ATP8A1Q9Y2Q0 1164 aa11□□□□□ -0.65
SHMT2-218ENST00000555213 TSPAN11A1L157 253 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 FAM47DPA6NHR8 397 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 C16orf96A6NNT2 1141 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 NEMP1O14524 444 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 HRO43593 1189 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 PLRG1O43660 514 aaKnown RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 OPHN1O60890 802 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 BCKDHBP21953 392 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 CD68P34810 354 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 DRD3P35462 400 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ACTN2P35609 894 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 NBL1P41271 181 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 DPP6P42658 865 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 DSC2Q02487 901 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ELP6Q0PNE2 266 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SRSF5Q13243 272 aaKnown RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 PRPSAP1Q14558 356 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 KCNJ11Q14654 390 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SLC14A2Q15849 920 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 UAP1Q16222 522 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ANKRD20A2Q5SQ80 823 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 UBAP2Q5T6F2 1119 aaKnown RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 PIP5KL1Q5T9C9 394 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ARMC12Q5T9G4 340 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ANKRD20A1Q5TYW2 823 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 AGBL4Q5VU57 503 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ANKRD20A3Q5VUR7 823 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 IZUMO3Q5VZ72 239 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 EMBQ6PCB8 327 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ARHGEF18Q6ZSZ5 1173 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 PARS2Q7L3T8 475 aaKnown RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 CAMK1DQ8IU85 385 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 IQCKQ8N0W5 287 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ZNF567Q8N184 647 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 MREGQ8N565 214 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 CADM4Q8NFZ8 388 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 OR2T34Q8NGX1 318 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 PDCD6IPQ8WUM4 868 aaKnown RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 TEKT5Q96M29 485 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SPATA13Q96N96 652 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 GPR174Q9BXC1 333 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SLC25A51Q9H1U9 297 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ETNK1Q9HBU6 452 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 ARFGAP3Q9NP61 516 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 FAM53CQ9NYF3 392 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 WSB2Q9NYS7 404 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SERGEFQ9UGK8 458 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 RSPH14Q9UHP6 348 aa10.99□□□□□ -0.65
SHMT2-218ENST00000555213 SMG5Q9UPR3 1016 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms