RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 EXOC2Q96KP1 924 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SRPK1Q96SB4 655 aaKnown RBP10.69□□□□□ -0.7
TMEM260-206ENST00000555046 NAP1L3Q99457 506 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-206ENST00000555046 IL12RB2Q99665 862 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 ADGRE3Q9BY15 652 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 C6orf106Q9H6K1 298 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-206ENST00000555046 NOD2Q9HC29 1040 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SEMA4GQ9NTN9 838 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SEPT10Q9P0V9 454 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SERGEFQ9UGK8 458 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 PHTF1Q9UMS5 762 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 SLC6A14Q9UN76 642 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 PACSIN2Q9UNF0 486 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-206ENST00000555046 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
TMEM260-206ENST00000555046 ATP8A1Q9Y2Q0 1164 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 FADS3Q9Y5Q0 445 aa10.69□□□□□ -0.7
TMEM260-206ENST00000555046 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 KIAA1549LQ6ZVL6 1849 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TSPAN11A1L157 253 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TMEM8BA6NDV4 472 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PRAMEF26H0Y7S4 382 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 KCNK1O00180 336 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 KCNK3O14649 394 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 HTRA2O43464 458 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 LATO43561 262 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 DFNA5O60443 496 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 MAP3K6O95382 1288 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TIMP2P16035 220 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ITPKAP23677 461 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 GKP32189 559 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ATXN3P54252 364 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 EPHB1P54762 984 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 EIF3EP60228 445 aaKnown RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 RACK1P63244 317 aaKnown RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SPEM2Q0P670 501 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PRPSAP1Q14558 356 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 STAT4Q14765 748 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PRKD1Q15139 912 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 NOMO1Q15155 1222 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 LLGL1Q15334 1064 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SLC14A2Q15849 920 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ZNF569Q5MCW4 686 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PLA2G2CQ5R387 149 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ALG1LQ6GMV1 187 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 DARS2Q6PI48 645 aaKnown RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SLC23A3Q6PIS1 610 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 NPNTQ6UXI9 565 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ARMCX6Q7L4S7 300 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PID1Q7Z2X4 250 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ADAT2Q7Z6V5 191 aaKnown RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SLC41A1Q8IVJ1 513 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 CXorf40AQ8TE69 158 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ECHDC3Q96DC8 303 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 PBKQ96KB5 322 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TEKT5Q96M29 485 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SLC25A51Q9H1U9 297 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TRMT1Q9NXH9 659 aaKnown RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 SAE1Q9UBE0 346 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-206ENST00000555046 ZKSCAN5Q9Y2L8 839 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 TTLL3Q9Y4R7 772 aa10.68□□□□□ -0.7
TMEM260-206ENST00000555046 A0A1W2PQU0 124 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 GOLGA6CA6NDK9 693 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 GOLGA6BA6NDN3 693 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 UPK3BL1B0FP48 263 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 UPK3BL2E5RIL1 263 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 TRAFD1O14545 582 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 TOR1BO14657 336 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 AREL1O15033 823 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 MUSKO15146 869 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 PIGNO95427 931 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 CFIP05156 583 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 GOLGA6DP0CG33 693 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 RBP3P10745 1247 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 CYP2A6P11509 494 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 AKT2P31751 481 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 ACTN2P35609 894 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 RGRP47804 291 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 C21orf59P57076 290 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 TAS2R38P59533 333 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 MAXP61244 160 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 FAM193AP78312 1265 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 OTUD4Q01804 1114 aaKnown RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 ZNF211Q13398 564 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 TMEM52BQ4KMG9 183 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 PEAR1Q5VY43 1037 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 ITPRIPL1Q6GPH6 555 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 USP45Q70EL2 814 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 PARS2Q7L3T8 475 aaKnown RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 DCP2Q8IU60 420 aaKnown RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 REXO1L1PQ8IX06 675 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 PGBD5Q8N414 524 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 PDCD6IPQ8WUM4 868 aaKnown RBP10.67□□□□□ -0.7
TMEM260-206ENST00000555046 SERAC1Q96JX3 654 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 AGAP3Q96P47 875 aa10.67□□□□□ -0.7
TMEM260-206ENST00000555046 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms