RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KLHDC10Q6PID8 442 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 KBTBD6Q86V97 674 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 DHFR2Q86XF0 187 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 SKA2Q8WVK7 121 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 NSUN5Q96P11 429 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 SMIM14Q96QK8 99 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 GPR22Q99680 433 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 CATSPERBQ9H7T0 1116 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 EML4Q9HC35 981 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TNFRSF12AQ9NP84 129 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 CNGB3Q9NQW8 809 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 EIF2B3Q9NR50 452 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TMLHEQ9NVH6 421 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ACTL7AQ9Y615 435 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TRIP12Q14669 1992 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 A0A1W2PQH9 124 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ARL5CA6NH57 179 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 H3BNX3 289 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 RHOBTB1O94844 696 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 FBXO21O94952 628 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 NR4A1P22736 598 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 LHX1P48742 406 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 NAB1Q13506 487 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ANKRD49Q8WVL7 239 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PSMG2Q969U7 264 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ITGB1P05556 798 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 IRF1P10914 325 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 TAS2R42Q7RTR8 314 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MFSD6LQ8IWD5 586 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 CDC26Q8NHZ8 85 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 C6orf203Q9P0P8 240 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 A8MT66 165 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 TRIM38O00635 465 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 CNTN5O94779 1100 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 RTN3O95197 1032 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SNRPB2P08579 225 aaKnown RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ODC1P11926 461 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF23P17027 643 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 PIK3CGP48736 1102 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SCNN1BP51168 640 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SLC5A3P53794 718 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MGAT5BQ3V5L5 792 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 THEM5Q8N1Q8 247 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ATAD1Q8NBU5 361 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 BRI3BPQ8WY22 251 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 EZH1Q92800 747 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 RCOR3Q9P2K3 495 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ARL5AQ9Y689 179 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SDHDO14521 159 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 IL1BP01584 269 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 HNRNPCP07910 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 LTA4HP09960 611 aaKnown RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 HGFP14210 728 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 HADHAP40939 763 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SERPINH1P50454 418 aaKnown RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ARSDP51689 593 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ESRRGP62508 458 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ZBTB6Q15916 424 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 CYP51A1Q16850 503 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MYLK3Q32MK0 819 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 KCTD21Q4G0X4 260 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 HECTD2Q5U5R9 776 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 PGM2L1Q6PCE3 622 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MIER2Q8N344 545 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 TOP6BLQ8N6T0 577 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 OR13C4Q8NGS5 318 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MAGEE2Q8TD90 523 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 SEMA3CQ99985 751 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MRPL57Q9BQC6 102 aaKnown RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ADNPQ9H2P0 1102 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 MARCH4Q9P2E8 410 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 PTPRFP10586 1907 aa11.92□□□□□ -0.5
XRCC3-208ENST00000554811 NUP214P35658 2090 aaPredicted RBP11.92□□□□□ -0.5
XRCC3-208ENST00000554811 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 TOMM70O94826 608 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 IPO13O94829 963 aaKnown RBP11.91□□□□□ -0.5
XRCC3-208ENST00000554811 GGT5P36269 586 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 PBX3P40426 434 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 SULT2A1Q06520 285 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 NFYCQ13952 458 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 FSCN1Q16658 493 aaKnown RBP11.91□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF423Q2M1K9 1284 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 PIWIL4Q7Z3Z4 852 aaKnown RBP11.91□□□□□ -0.5
XRCC3-208ENST00000554811 CBR4Q8N4T8 237 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 SHCBP1Q8NEM2 672 aa11.91□□□□□ -0.5
XRCC3-208ENST00000554811 HMCESQ96FZ2 354 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms