RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CAPNS1P04632 268 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 KRT7P08729 469 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 TMEM253P0C7T8 217 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 NME1P15531 152 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 ITIH2P19823 946 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 IL4RP24394 825 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 NFKBIAP25963 317 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 MAN1A1P33908 653 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 HNF1BP35680 557 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 RGRP47804 291 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 PEX5P50542 639 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 SCNN1BP51168 640 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 DUSP3P51452 185 aaPredicted RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 DAB2P98082 770 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 SLC10A7Q0GE19 358 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 DNAJC3Q13217 504 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 ZNF235Q14590 738 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 LRRC14Q15048 493 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 PROX2Q3B8N5 592 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 LRRC73Q5JTD7 316 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 TP53INP2Q8IXH6 220 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 ATPAF2Q8N5M1 289 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 PAF1Q8N7H5 531 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 PDCD7Q8N8D1 485 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 TC2NQ8N9U0 490 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 TP53I13Q8NBR0 393 aaPredicted RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 SPOCK2Q92563 424 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 TBATAQ96M53 351 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 CCDC42Q96M95 316 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 WRAP53Q9BUR4 548 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 CCDC86Q9H6F5 360 aaKnown RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 USP29Q9HBJ7 922 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 UCKL1Q9NWZ5 548 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 IMPACTQ9P2X3 320 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 DKK4Q9UBT3 224 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 LRP4O75096 1905 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 FRYQ5TBA9 3013 aa8.79□□□□□ -1
ACTN1-213ENST00000554508 ARHGEF17Q96PE2 2063 aaPredicted RBP8.79□□□□□ -1
ACTN1-213ENST00000554508 TRAFD1O14545 582 aaPredicted RBP8.78□□□□□ -1
ACTN1-213ENST00000554508 TPP1O14773 563 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MUSKO15146 869 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 AQP9O43315 295 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
ACTN1-213ENST00000554508 KRT37O76014 449 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 PEX11BO96011 259 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 GIMD1P0DJR0 217 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 CKMT1AP12532 417 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 C6P13671 934 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 JUPP14923 745 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 JUNDP17535 347 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 CR2P20023 1033 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 IGFALSP35858 605 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MMP12P39900 470 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ARHGAP25P42331 645 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 LIG3P49916 1009 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 BLKP51451 505 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ARSEP51690 589 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 EIF2B5Q13144 721 aaKnown RBP8.78□□□□□ -1
ACTN1-213ENST00000554508 CAMK2BQ13554 666 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 DPYSL3Q14195 570 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ATP13A4Q4VNC1 1196 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ZNF542PQ5EBM4 170 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MARC1Q5VT66 337 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MACC1Q6ZN28 852 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 DPPA4Q7L190 304 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ZSWIM9Q86XI8 627 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 PROSER1Q86XN7 944 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 RHOT2Q8IXI1 618 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 KCTD6Q8NC69 237 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ATL2Q8NHH9 583 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 RFFLQ8WZ73 363 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 GLMNQ92990 594 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 NUDCD1Q96RS6 583 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 CHP1Q99653 195 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MGME1Q9BQP7 344 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 ZNF670Q9BS34 389 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 APOOQ9BUR5 198 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 NHEJ1Q9H9Q4 299 aaPredicted RBP8.78□□□□□ -1
ACTN1-213ENST00000554508 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 MBNL1Q9NR56 388 aaKnown RBP8.78□□□□□ -1
ACTN1-213ENST00000554508 HAUS2Q9NVX0 235 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 KCTD5Q9NXV2 234 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 SPASTQ9UBP0 616 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 SALL4Q9UJQ4 1053 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 COQ6Q9Y2Z9 468 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
ACTN1-213ENST00000554508 UNC13CQ8NB66 2214 aa8.77□□□□□ -1.01
ACTN1-213ENST00000554508 TRABD2BA6NFA1 517 aa8.77□□□□□ -1.01
ACTN1-213ENST00000554508 SRRM3A6NNA2 597 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-213ENST00000554508 K7ESM1 405 aa8.77□□□□□ -1.01
ACTN1-213ENST00000554508 FFAR2O15552 330 aa8.77□□□□□ -1.01
ACTN1-213ENST00000554508 HTRA2O43464 458 aaPredicted RBP8.77□□□□□ -1.01
ACTN1-213ENST00000554508 MTA2O94776 668 aa8.77□□□□□ -1.01
ACTN1-213ENST00000554508 GP1BAP07359 652 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms