RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 HMBOX1Q6NT76 420 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 NEPROQ6NW34 567 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 KLHDC10Q6PID8 442 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RANBP10Q6VN20 620 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 USP50Q70EL3 339 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SCD5Q86SK9 330 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 LCA5Q86VQ0 697 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CHERPQ8IWX8 916 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CEP70Q8NHQ1 597 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PIP4K2CQ8TBX8 421 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 DLG3Q92796 817 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ASB9Q96DX5 294 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 LRCH3Q96II8 777 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 C3orf30Q96M34 536 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 KLHL5Q96PQ7 755 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SENP6Q9GZR1 1112 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 EPB41L1Q9H4G0 881 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF696Q9H7X3 374 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MEAF6Q9HAF1 191 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 OSER1Q9NX31 292 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MARCH4Q9P2E8 410 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CPA4Q9UI42 421 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RNF11Q9Y3C5 154 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 HS3ST4Q9Y661 456 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 LRRC14BA6NHZ5 514 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRPC5OSA6NMA1 111 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PLOD2O00469 737 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MGEA5O60502 916 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ALDOCP09972 364 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 OR4Q2P0C623 313 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RPS6KA3P51812 740 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC5A3P53794 718 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 NME5P56597 212 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRPS6P82932 125 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 POU4F1Q01851 419 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF33AQ06730 810 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PIK3R6Q5UE93 754 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 AFMIDQ63HM1 303 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 FAM171BQ6P995 826 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TFAP2DQ7Z6R9 452 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 AHI1Q8N157 1196 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 GRIN3AQ8TCU5 1115 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 IRGQQ8WZA9 623 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 EXT2Q93063 718 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ALG9Q9H6U8 611 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 COQ10BQ9H8M1 238 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 AGO3Q9H9G7 860 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRM3Q9HC36 420 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC38A7Q9NVC3 462 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 KCTD3Q9Y597 815 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PLXNA3P51805 1871 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 E9PAM4 449 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 J3KR12 359 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 AP3B1O00203 1094 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PSMD12O00232 456 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PPP6CO00743 305 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PSMD3O43242 534 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRPA1O75762 1119 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 IPO13O94829 963 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TNFAIP8O95379 198 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 WISP3O95389 354 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MMP2P08253 660 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 HAPLN1P10915 354 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ATP6V1B2P21281 511 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 DNAJB2P25686 324 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RPL10P27635 214 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCSK1P29120 753 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCSK6P29122 969 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CD86P42081 329 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RPL5P46777 297 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF135P52742 658 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC12A2P55011 1212 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 INHBCP55103 352 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PURAQ00577 322 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 DSC2Q02487 901 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 DYNC1I2Q13409 638 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRIM25Q14258 630 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SQLEQ14534 574 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PTPRCAPQ14761 206 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 FAM110CQ1W6H9 321 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 GPR158Q5T848 1215 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 HECTD2Q5U5R9 776 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SDHAF4Q5VUM1 108 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ANKRD23Q86SG2 305 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 RETREG3Q86VR2 466 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 TMEM126BQ8IUX1 230 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZFP28Q8NHY6 868 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 LPGAT1Q92604 370 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 PTERQ96BW5 349 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC29A1Q99808 456 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRPL1Q9BYD6 325 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRPS26Q9BYN8 205 aaKnown RBP6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 UNC93B1Q9H1C4 597 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SMOC2Q9H3U7 446 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 VCX3AQ9NNX9 186 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms