RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TBX4P57082 545 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ITKQ08881 620 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 EARS2Q5JPH6 523 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM131AQ6UXB0 335 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ZYG11AQ6WRX3 759 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF438Q7Z4V0 828 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 COA7Q96BR5 231 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 TBC1D20Q96BZ9 403 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 BIRC7Q96CA5 298 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PARK7Q99497 189 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 POMPQ9Y244 141 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PRAMEF33A0A0G2JMD5 474 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 IRS4O14654 1257 aaPredicted RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 EPHB6O15197 1021 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PRAMEF10O60809 474 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ZDHHC11BP0C7U3 371 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 NCK1P16333 377 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 NPY2RP49146 381 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RAB2AP61019 212 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 BPIFB1Q8TDL5 484 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ZFP90Q8TF47 636 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RPF2Q9H7B2 306 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 BRD9Q9H8M2 597 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 DYRK4Q9NR20 520 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 A0A087X0B3 334 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 C1orf196B1AJZ1 125 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 HSPA12AO43301 675 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 DDAH1O94760 285 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RECQL5O94762 991 aaPredicted RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 GNG10P50151 68 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FPGSQ05932 587 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 NFATC3Q12968 1075 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 BTBD8Q5XKL5 378 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 CEP97Q8IW35 865 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM45AQ8TCE6 357 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 TANKQ92844 425 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RNF34Q969K3 372 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PAFAH2Q99487 392 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 EYA1Q99502 592 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PI4K2AQ9BTU6 479 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ANO3Q9BYT9 981 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 KCNN2Q9H2S1 579 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ADAM7Q9H2U9 754 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 XPNPEP1Q9NQW7 623 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 KCNQ5Q9NR82 932 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 POLR3HQ9Y535 204 aaPredicted RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 A6NCN8 305 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RHPN2P1A8MT19 583 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM86B1E9PN63 330 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RASGRP1O95267 797 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RALAP11233 206 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF35P13682 527 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FASP25445 335 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PIK3R1P27986 724 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FEN1P39748 380 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 GRIA3P42263 894 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 SERPINB9P50453 376 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 EMP3P54852 163 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PPATQ06203 517 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FGFBP1Q14512 234 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 VWA5B1Q5TIE3 1220 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 AGAP7PQ5VUJ5 663 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 OR10T2Q8NGX3 314 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 AKAP7Q9P0M2 348 aaPredicted RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC17A7Q9P2U7 560 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 UBQLN2Q9UHD9 624 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 IRS2Q9Y4H2 1338 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 PSAT1Q9Y617 370 aa9.05□□□□□ -0.96
GTF2A1-203ENST00000553612 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 MAPKAPK2P49137 400 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PPIL2Q13356 520 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SETMARQ53H47 684 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM102BQ5T8I3 360 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 AMER2Q8N7J2 671 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 GSDMCQ9BYG8 508 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ARHGAP5Q13017 1502 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 USP17L21D6R901 530 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 HTR3BO95264 441 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 GJA1P17302 382 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 NUMBP49757 651 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 KYAT1Q16773 422 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 NOMO2Q5JPE7 1267 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ANKRD26P1Q6NSI1 321 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 VSTM1Q6UX27 236 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 LRRC8DQ7L1W4 858 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 LGI2Q8N0V4 545 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 DENND6BQ8NEG7 585 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 VRK1Q99986 396 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 HOXD1Q9GZZ0 328 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 HSD3B7Q9H2F3 369 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 VSX1Q9NZR4 365 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms