RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 MMP12P39900 470 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 ARL4AP40617 200 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 AP1S1P61966 158 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 POLR2LP62875 67 aaKnown RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 PPARDQ03181 441 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 BCL2L1Q07817 233 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 IQCB1Q15051 598 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 NR0B2Q15466 257 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 DEFB133Q30KQ1 61 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 TDRD12Q587J7 1177 aaKnown RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 PRRT3Q5FWE3 981 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 FAXCQ5TGI0 409 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 TMCO4Q5TGY1 634 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 CYP4V2Q6ZWL3 525 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 CAMK1DQ8IU85 385 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 ARHGAP12Q8IWW6 846 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 RBFAQ8N0V3 343 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 FSTL5Q8N475 847 aaPredicted RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 PAF1Q8N7H5 531 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 TSEN2Q8NCE0 465 aaKnown RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 MAPK15Q8TD08 544 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 NAT6Q93015 286 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 GRAMD1AQ96CP6 724 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 ZNF599Q96NL3 588 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 TRIM7Q9C029 511 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 MBNL1Q9NR56 388 aaKnown RBP15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 MYO1AQ9UBC5 1043 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 LRRK1Q38SD2 2015 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 ANKRD36A6QL64 1941 aa15.25■□□□□ 0.03
SDR39U1-205ENST00000553546 A0A1W2PQJ5 194 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 EME2A4GXA9 379 aaPredicted RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 BRINP1O60477 761 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 SKILP12757 684 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 ITIH2P19823 946 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 EIF2S3P41091 472 aaKnown RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 DPYSQ14117 519 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 PIGHQ14442 188 aaPredicted RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 ELOCQ15369 112 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 DPYSL2Q16555 572 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 CDKN3Q16667 212 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 BOLA3Q53S33 107 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 C6orf132Q5T0Z8 1188 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 LSMEM2Q8N112 164 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 SDR16C5Q8N3Y7 309 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 NPWQ8N729 165 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 WDR48Q8TAF3 677 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 SCG3Q8WXD2 468 aaKnown RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 SYN2Q92777 582 aaPredicted RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 FGF11Q92914 225 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 PSKH2Q96QS6 385 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 FUCA2Q9BTY2 467 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 BOCQ9BWV1 1114 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 CAAP1Q9H8G2 361 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 CWC15Q9P013 229 aaKnown RBP15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 SEPT3Q9UH03 358 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 DOLKQ9UPQ8 538 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 COQ6Q9Y2Z9 468 aa15.24■□□□□ 0.03
SDR39U1-205ENST00000553546 ASXL3Q9C0F0 2248 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 A0A1W2PQ67 120 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 CPED1A4D0V7 1026 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 TLX3O43711 291 aaPredicted RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 BUB1BO60566 1050 aaPredicted RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 CSO75390 466 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 RASGRP1O95267 797 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 ALPIP09923 528 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 HSPA9P38646 679 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 RGRP47804 291 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 LIG3P49916 1009 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 HK3P52790 923 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 MTM1Q13496 603 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 NFATC4Q14934 902 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 WSCD2Q2TBF2 565 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 TBC1D25Q3MII6 688 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 ESRP1Q6NXG1 681 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 GUSBP11Q6P575 273 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 EFL1Q7Z2Z2 1120 aaKnown RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 BBS5Q8N3I7 341 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 APOOQ9BUR5 198 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 TCEAL2Q9H3H9 227 aaPredicted RBP15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 SHROOM3Q8TF72 1996 aa15.23■□□□□ 0.03
SDR39U1-205ENST00000553546 USP12O75317 370 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 GCATO75600 419 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 TCEA3O75764 348 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 SERPING1P05155 500 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 ELFN1P0C7U0 828 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 MYF5P13349 255 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 CTSEP14091 401 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 TSHRP16473 764 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 NFKBIAP25963 317 aa15.22■□□□□ 0.03
SDR39U1-205ENST00000553546 SERPINB6P35237 376 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms