RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ABCG1P45844 678 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 PDE1BQ01064 536 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 CTBP1Q13363 440 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 LAMB3Q13751 1172 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 ANKRD54Q6NXT1 300 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 LVRNQ6Q4G3 990 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 GET4Q7L5D6 327 aaPredicted RBP19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 TAX1BP1Q86VP1 789 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 ZC3HC1Q86WB0 502 aaKnown RBP19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 NDUFAF2Q8N183 169 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 DCLK2Q8N568 766 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 C2CD4AQ8NCU7 369 aaPredicted RBP19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 OR6K2Q8NGY2 324 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 PTPRN2Q92932 1015 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 ATXN7L3BQ96GX2 97 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 SLC2A11Q9BYW1 496 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 PCMTD2Q9NV79 361 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 RIMKLBQ9ULI2 386 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 MTO1Q9Y2Z2 717 aaKnown RBP19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 MYO9BQ13459 2157 aa19.67■□□□□ 0.74
RBFOX1-215ENST00000553186 SLC7A4O43246 635 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 SLC1A2P43004 574 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 IL9RQ01113 521 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 THOC5Q13769 683 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 DMC1Q14565 340 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PTPRCAPQ14761 206 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 QPCTQ16769 361 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 TMEM215Q68D42 235 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 NAT16Q8N8M0 369 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 MDGA1Q8NFP4 955 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 BPIFB1Q8TDL5 484 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 HDAC10Q969S8 669 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 VPS39Q96JC1 886 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PAIP2Q9BPZ3 127 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 SLC13A1Q9BZW2 595 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 TNKS2Q9H2K2 1166 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 RHOJQ9H4E5 214 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 EVLQ9UI08 416 aaPredicted RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 NUP210Q8TEM1 1887 aaPredicted RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 CCL22O00626 93 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 TRAFD1O14545 582 aaPredicted RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 TIMM44O43615 452 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 BUD23O43709 281 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 DHRS4L1P0CG22 281 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 FOXN2P32314 431 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 SLC8A1P32418 973 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 CRHR1P34998 444 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 MPP1Q00013 466 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PDE1CQ14123 709 aaPredicted RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 ZNF470Q6ECI4 717 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 CAMK1DQ8IU85 385 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 ACVR1CQ8NER5 493 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PDCD6IPQ8WUM4 868 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 ISG20Q96AZ6 181 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 DNAJC1Q96KC8 554 aaKnown RBP19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 MAGEB18Q96M61 343 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 FAM167BQ9BTA0 163 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 TRPV4Q9HBA0 871 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PLLPQ9Y342 182 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 PCDHB9Q9Y5E1 797 aa19.66■□□□□ 0.74
RBFOX1-215ENST00000553186 FCARP24071 287 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 ECT2LQ008S8 904 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 OR2AP1Q8NGE2 309 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 OR13C4Q8NGS5 318 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 STYXQ8WUJ0 223 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 TBATAQ96M53 351 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 GPR22Q99680 433 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 MFSD1Q9H3U5 465 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 SNX15Q9NRS6 342 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 FBXO5Q9UKT4 447 aa19.65■□□□□ 0.74
RBFOX1-215ENST00000553186 NDUFAB1O14561 156 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 HOXC11O43248 304 aaPredicted RBP19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 HTRA2O43464 458 aaPredicted RBP19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 PGLSO95336 258 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 BMP1P13497 986 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 DRD4P21917 467 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 PSMA3P25788 255 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 GKP32189 559 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 MAPK8P45983 427 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 ZNF140P52738 457 aaPredicted RBP19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 SULT2A1Q06520 285 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 TAF1AQ15573 450 aaPredicted RBP19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 UGP2Q16851 508 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 KIAA0408Q6ZU52 694 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 CMC1Q7Z7K0 106 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 SPOCK2Q92563 424 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 FAM111AQ96PZ2 611 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 FAM107BQ9H098 131 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 SLCO3A1Q9UIG8 710 aa19.64■□□□□ 0.74
RBFOX1-215ENST00000553186 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 HEPACAM2A8MVW5 462 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 CRTAMO95727 393 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 IGSF6O95976 241 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 TOP3BO95985 862 aaKnown RBP19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 ADH5P11766 374 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 TYK2P29597 1187 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 CCT5P48643 541 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 CSRP3P50461 194 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms