RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MUC13Q9H3R2 512 aa5.62□□□□□ -1.51
CPSF6-206ENST00000550987 ADARB2Q9NS39 739 aaKnown RBP5.62□□□□□ -1.51
CPSF6-206ENST00000550987 CNOT11Q9UKZ1 510 aaKnown RBP5.62□□□□□ -1.51
CPSF6-206ENST00000550987 TNFSF13BQ9Y275 285 aa5.62□□□□□ -1.51
CPSF6-206ENST00000550987 RAB3GAP2Q9H2M9 1393 aa5.62□□□□□ -1.51
CPSF6-206ENST00000550987 FBN2P35556 2912 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 A0A0G2JMZ2 1700 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 C17orf113A0A1B0GUU1 675 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 OR6C68A6NDL8 312 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 PABPN1LA6NDY0 278 aaKnown RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TMEM247A6NEH6 219 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 LRRC53A6NM62 1247 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 CCER2I3L3R5 266 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TGFB1I1O43294 461 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TACC1O75410 805 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 CACNA1HO95180 2353 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ESRRBO95718 433 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 EIF2S1P05198 315 aaKnown RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 GALTP07902 379 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ADRB1P08588 477 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 RFPL3SP0C7P2 107 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ELFN1P0C7U0 828 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 FCGR2AP12318 317 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 CPOXP36551 454 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 HADHAP40939 763 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ZNF84P51523 738 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 DAPK1P53355 1430 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 NLRP5P59047 1200 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 PRAMEP78395 509 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 DGCR2P98153 550 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 HOXA4Q00056 320 aaPredicted RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 CPSF1Q10570 1443 aaKnown RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ARL13AQ5H913 290 aaPredicted RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ZNF667Q5HYK9 610 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TMEM268Q5VZI3 342 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TTI2Q6NXR4 508 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 PDXDC1Q6P996 788 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 CYP20A1Q6UW02 462 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 IL20RBQ6UXL0 311 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 TRIM72Q6ZMU5 477 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 RHOUQ7L0Q8 258 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SLC46A3Q7Z3Q1 461 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 KLBQ86Z14 1044 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 UEVLDQ8IX04 471 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 LINC01465Q8N7H1 131 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SCAIQ8N9R8 606 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ARHGEF2Q92974 986 aaKnown RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ATP2A3Q93084 1043 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 INTS12Q96CB8 462 aaKnown RBP5.61□□□□□ -1.51
CPSF6-206ENST00000550987 MACROD1Q9BQ69 325 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 MXD3Q9BW11 206 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 IFT27Q9BW83 186 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 AP1M1Q9BXS5 423 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SH2D4AQ9H788 454 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 ENTPD7Q9NQZ7 604 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 MAFFQ9ULX9 164 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SLC8A2Q9UPR5 921 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 DTX4Q9Y2E6 619 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SNX8Q9Y5X2 465 aa5.61□□□□□ -1.51
CPSF6-206ENST00000550987 SPTBN2O15020 2390 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 ZSWIM8A7E2V4 1837 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SLX4Q8IY92 1834 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SCN7AQ01118 1682 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 FAM208AQ9UK61 1670 aaKnown RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 COL3A1P02461 1466 aaPredicted RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 KIF24Q5T7B8 1368 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 A0A0G2JLL6 359 aaPredicted RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 TCRBV7S3A2A0A539 114 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 ARHGAP10A1A4S6 786 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 LIPT2A6NK58 231 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 BEST1O76090 585 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CYP2D6P10635 497 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 AKR1A1P14550 325 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 POU1F1P28069 291 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 TYK2P29597 1187 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 GCH1P30793 250 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 ICAM3P32942 547 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 TAP1Q03518 808 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SREBF2Q12772 1141 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 LRMPQ12912 555 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SLC14A1Q13336 389 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 KPNB1Q14974 876 aaKnown RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 VEPH1Q14D04 833 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 DUSP28Q4G0W2 176 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 FBXO43Q4G163 708 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CEP85Q6P2H3 762 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 TMEM154Q6P9G4 183 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 KLHL35Q6PF15 583 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SZRD1Q7Z422 152 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 WDTC1Q8N5D0 677 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 SETD9Q8NE22 299 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CADM4Q8NFZ8 388 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 U2AF1L4Q8WU68 220 aaKnown RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CACTINQ8WUQ7 758 aaKnown RBP5.6□□□□□ -1.51
CPSF6-206ENST00000550987 KAZALD1Q96I82 304 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 COQ10AQ96MF6 247 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 CMTM3Q96MX0 182 aa5.6□□□□□ -1.51
CPSF6-206ENST00000550987 HEMGNQ9BXL5 484 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms