RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RALAP11233 206 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 MYL4P12829 197 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 GABRR2P28476 465 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 RFC1P35251 1148 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGAP25P42331 645 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 PTPN9P43378 593 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 MEOX1P50221 254 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 VAV2P52735 878 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 KIF5AQ12840 1032 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 MTF1Q14872 753 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 ACAP1Q15027 740 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 AAK1Q2M2I8 961 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 SLC25A52Q3SY17 297 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 LEXMQ3ZCV2 418 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 HECTD3Q5T447 861 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 OR6B2Q6IFH4 312 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 DCUN1D2Q6PH85 259 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 GAREM2Q75VX8 874 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 RSRC2Q7L4I2 434 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 GRASPQ7Z6J2 395 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 KIAA1328Q86T90 577 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 JAZF1Q86VZ6 243 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 PALM2Q8IXS6 379 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 RNF10Q8N5U6 811 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 C12orf76Q8N812 135 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 NIPA2Q8N8Q9 360 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 MAFAQ8NHW3 353 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 RNF139Q8WU17 664 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 RFFLQ8WZ73 363 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 CFHR4Q92496 578 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 E2F7Q96AV8 911 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 PGAP3Q96FM1 320 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 C16orf92Q96LL3 132 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 CNPY3Q9BT09 278 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 DDX23Q9BUQ8 820 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 SELENOOQ9BVL4 669 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 THAP2Q9H0W7 228 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 OR10A2Q9H208 303 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 C12orf65Q9H3J6 166 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 SMOC2Q9H3U7 446 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 TASP1Q9H6P5 420 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 NMUR1Q9HB89 426 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 TRPV4Q9HBA0 871 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF334Q9HCZ1 680 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 HCFC1R1Q9NWW0 138 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 CNOT8Q9UFF9 292 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 STAP1Q9ULZ2 295 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 MAGED2Q9UNF1 606 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 REXO2Q9Y3B8 237 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 HBS1LQ9Y450 684 aaKnown RBP5.95□□□□□ -1.46
SCAF11-213ENST00000550629 TCAF1Q9Y4C2 921 aa5.95□□□□□ -1.46
SCAF11-213ENST00000550629 REV3LO60673 3130 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MTCL1Q9Y4B5 1905 aaKnown RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 UBA6A0AVT1 1052 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 C2CD4BA6NLJ0 364 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 GOLGA8SH3BPF8 625 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MYO1FO00160 1098 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CYR61O00622 381 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CAPN9O14815 690 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 COCHO43405 550 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 KRT86O43790 486 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 TLR5O60602 858 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CDC14BO60729 498 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MOSPD3O75425 235 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ENDOD1O94919 500 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 IGLV3-25P01717 112 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CYP17A1P05093 508 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 RARGP13631 454 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 PDGFRAP16234 1089 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 HDCP19113 662 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ABCB4P21439 1286 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 GPD1P21695 349 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 KCNA5P22460 613 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SDC4P31431 198 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MAN1A1P33908 653 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ATP5C1P36542 298 aaKnown RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CCR2P41597 374 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SELENOPP49908 381 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SLC7A9P82251 487 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 COG7P83436 770 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ROM1Q03395 351 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 PIGHQ14442 188 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 TAF5Q15542 800 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SLC5A9Q2M3M2 681 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 DCAF6Q58WW2 860 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 C10orf120Q5SQS8 335 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 C11orf63Q6NUN7 778 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CRIP3Q6Q6R5 217 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 STRADAQ7RTN6 431 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 BNIPLQ7Z465 357 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CMTM8Q8IZV2 173 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 OR14K1Q8NGZ2 314 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SLC35G2Q8TBE7 412 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 DQX1Q8TE96 717 aaKnown RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CLEC4CQ8WTT0 213 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CENPIQ92674 756 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms