RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 PPP1R16AQ96I34 528 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 GORASP1Q9BQQ3 440 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 NUSAP1Q9BXS6 441 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 OSBPL1AQ9BXW6 950 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 LUC7LQ9NQ29 371 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 SCUBE2Q9NQ36 999 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 AASDHPPTQ9NRN7 309 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 VILLO15195 856 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 FZD6O60353 706 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 ALPIP09923 528 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PYGBP11216 843 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 CTPS1P17812 591 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PTPN3P26045 913 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 IGFALSP35858 605 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 GRIA4P48058 902 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 AFF3P51826 1226 aaKnown RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 LIMK1P53667 647 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 AP1S1P61966 158 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 IFI35P80217 286 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 SKOR1P84550 965 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 BCL2L1Q07817 233 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 AP1B1Q10567 949 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TMEM52BQ4KMG9 183 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PEX26Q7Z412 305 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TP53I13Q8NBR0 393 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 SPATA22Q8NHS9 363 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PDCD6IPQ8WUM4 868 aaKnown RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PIH1D2Q8WWB5 315 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 FATE1Q969F0 183 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 ZNF641Q96N77 438 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TUBGCP5Q96RT8 1024 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 MAK16Q9BXY0 300 aaKnown RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 SLC17A9Q9BYT1 436 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 ATP13A3Q9H7F0 1226 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TMEM9BQ9NQ34 198 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 SEPT10Q9P0V9 454 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 SUSD2Q9UGT4 822 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 BTBD3Q9Y2F9 522 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TTLL3Q9Y4R7 772 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 RAI2Q9Y5P3 530 aa11.29□□□□□ -0.6
RAB5B-208ENST00000550283 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
RAB5B-208ENST00000550283 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 PRR5-ARHGAP8B1AHC4 643 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 PGLSO95336 258 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 C6P13671 934 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 GNSP15586 552 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CD38P28907 300 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 SERPINA4P29622 427 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 PTPN7P35236 360 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CD86P42081 329 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 LIG3P49916 1009 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 RWDD2BP57060 319 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 NXPH1P58417 271 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 ARHGAP8P85298 464 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 RAD51Q06609 339 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 ITKQ08881 620 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 SFSWAPQ12872 951 aaKnown RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 NOMO1Q15155 1222 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 WSCD2Q2TBF2 565 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 ZNF542PQ5EBM4 170 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 NEK5Q6P3R8 708 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 MICALCLQ6ZW33 695 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 PLA2G15Q8NCC3 412 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 ACTL9Q8TC94 416 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 TADA1Q96BN2 335 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CENPTQ96BT3 561 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 RBM41Q96IZ5 413 aaKnown RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 QKIQ96PU8 341 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 GAREM1Q9H706 876 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 GPR27Q9NS67 375 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 DNAAF2Q9NVR5 837 aaKnown RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 AMFRQ9UKV5 643 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
RAB5B-208ENST00000550283 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
RAB5B-208ENST00000550283 TRPM6Q9BX84 2022 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 PRAMEF26H0Y7S4 382 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 K7ESM1 405 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TLR4O00206 839 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms