RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CHKBQ9Y259 395 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.69■■□□□ 1.22
BRF1-216ENST00000550208 PI4KAP42356 2102 aa22.69■■□□□ 1.22
BRF1-216ENST00000550208 USP34Q70CQ2 3546 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 KIF5CO60282 957 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 FZD6O60353 706 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 SERPINF2P08697 491 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 PRLRP16471 622 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 ELP6Q0PNE2 266 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 FGL2Q14314 439 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 ARMC12Q5T9G4 340 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 KIAA1161Q6NSJ0 714 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 PRR23CQ6ZRP0 262 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 PIH1D2Q8WWB5 315 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 IMP4Q96G21 291 aaKnown RBP22.68■■□□□ 1.22
BRF1-216ENST00000550208 SERAC1Q96JX3 654 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 SLC6A18Q96N87 628 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 RBM15Q96T37 977 aaKnown RBP eCLIP22.68■■□□□ 1.22
BRF1-216ENST00000550208 WRAP53Q9BUR4 548 aaKnown RBP22.68■■□□□ 1.22
BRF1-216ENST00000550208 SLC17A9Q9BYT1 436 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 USP29Q9HBJ7 922 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 KLHL8Q9P2G9 620 aaPredicted RBP22.68■■□□□ 1.22
BRF1-216ENST00000550208 PHTF1Q9UMS5 762 aa22.68■■□□□ 1.22
BRF1-216ENST00000550208 TRPM6Q9BX84 2022 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 A0A1W2PQ67 120 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 A8MX80 341 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 CEP104O60308 925 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 PAK4O96013 591 aaPredicted RBP22.67■■□□□ 1.22
BRF1-216ENST00000550208 CPP00450 1065 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 PRLP01236 227 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 HOXD11P31277 338 aaPredicted RBP22.67■■□□□ 1.22
BRF1-216ENST00000550208 CSNK1EP49674 416 aaKnown RBP22.67■■□□□ 1.22
BRF1-216ENST00000550208 PTPRRQ15256 657 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 SETMARQ53H47 684 aaPredicted RBP22.67■■□□□ 1.22
BRF1-216ENST00000550208 ERAP2Q6P179 960 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 RABEPKQ7Z6M1 372 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 SPATA22Q8NHS9 363 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 SLC35B2Q8TB61 432 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 CXorf40AQ8TE69 158 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 SPOCK2Q92563 424 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 SMIM14Q96QK8 99 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 VAT1Q99536 393 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 C1QTNF2Q9BXJ5 285 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 CAPN10Q9HC96 672 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 RXFP3Q9NSD7 469 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 CA5BQ9Y2D0 317 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 WDR87Q6ZQQ6 2873 aa22.67■■□□□ 1.22
BRF1-216ENST00000550208 PRR5-ARHGAP8B1AHC4 643 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 KCNN4O15554 427 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 ATP1A1P05023 1023 aaKnown RBP22.66■■□□□ 1.22
BRF1-216ENST00000550208 NFKB1P19838 968 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 NUDT1P36639 197 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 RACK1P63244 317 aaKnown RBP22.66■■□□□ 1.22
BRF1-216ENST00000550208 SGCGQ13326 291 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 C12orf50Q8NA57 414 aaPredicted RBP22.66■■□□□ 1.22
BRF1-216ENST00000550208 ATG4AQ8WYN0 398 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 MYOCQ99972 504 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 NUSAP1Q9BXS6 441 aaKnown RBP22.66■■□□□ 1.22
BRF1-216ENST00000550208 TDRD1Q9BXT4 1180 aaKnown RBP22.66■■□□□ 1.22
BRF1-216ENST00000550208 FZD3Q9NPG1 666 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 AASDHPPTQ9NRN7 309 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 TRHDEQ9UKU6 1024 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 DNPEPQ9ULA0 475 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 DMTF1Q9Y222 760 aa22.66■■□□□ 1.22
BRF1-216ENST00000550208 PLXNA2O75051 1894 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 A0A1B0GVT2 93 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 F5H423 210 aaPredicted RBP22.65■■□□□ 1.22
BRF1-216ENST00000550208 MT-CYBP00156 380 aaPredicted RBP22.65■■□□□ 1.22
BRF1-216ENST00000550208 WNT1P04628 370 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 CTPS1P17812 591 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 MMP12P39900 470 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 LIG3P49916 1009 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 RALGDSQ12967 914 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 SIX1Q15475 284 aaPredicted RBP22.65■■□□□ 1.22
BRF1-216ENST00000550208 NAPEPLDQ6IQ20 393 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 LAYNQ6UX15 382 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 KDELC2Q7Z4H8 507 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 C1orf54Q8WWF1 131 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 TADA1Q96BN2 335 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 FERMT1Q9BQL6 677 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 PCDH9Q9HC56 1237 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 UBP1Q9NZI7 540 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 B4GALT6Q9UBX8 382 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 COQ6Q9Y2Z9 468 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 PPIL1Q9Y3C6 166 aa22.65■■□□□ 1.22
BRF1-216ENST00000550208 FRYLO94915 3013 aa22.64■■□□□ 1.22
BRF1-216ENST00000550208 A0A1W2PR77 199 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 PRAMEF26H0Y7S4 382 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 RAD51BO15315 384 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 GDF9O60383 454 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 FGGP02679 453 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 AFF3P51826 1226 aaKnown RBP22.64■■□□□ 1.21
BRF1-216ENST00000550208 BNC1Q01954 994 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 ANKRD20A2Q5SQ80 823 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 ANKRD20A1Q5TYW2 823 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 ANKRD20A3Q5VUR7 823 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 DPPA4Q7L190 304 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 SCRN2Q96FV2 425 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 FCRL5Q96RD9 977 aa22.64■■□□□ 1.21
BRF1-216ENST00000550208 LNP1A1A4G5 178 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms