RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FAM207AQ9NSI2 230 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-205ENST00000550013 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
RAB5C-205ENST00000550013 ADAM22Q9P0K1 906 aa15.55■□□□□ 0.08
RAB5C-205ENST00000550013 DACH1Q9UI36 760 aa15.55■□□□□ 0.08
RAB5C-205ENST00000550013 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
RAB5C-205ENST00000550013 TMEM110-MUSTN1A8MSY1 372 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 CCP110O43303 1012 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 CREB3O43889 395 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 PRKCGP05129 697 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 RPLP0P05388 317 aaKnown RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 EEF1GP26641 437 aaKnown RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 SLC5A2P31639 672 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 UGT1A5P35504 534 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 BLKP51451 505 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 SRP54P61011 504 aaKnown RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 ELP6Q0PNE2 266 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 SRSF6Q13247 344 aaKnown RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 EFHC2Q5JST6 749 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 SCYL2Q6P3W7 929 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 LVRNQ6Q4G3 990 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 TRIM72Q6ZMU5 477 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 RAB11FIP2Q7L804 512 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 ZSWIM9Q86XI8 627 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 JAMLQ86YT9 394 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 PDXPQ96GD0 296 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 CCNL2Q96S94 520 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 KLQ9UEF7 1012 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 ATXN7L1Q9ULK2 861 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 DAAM1Q9Y4D1 1078 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 ARHGEF17Q96PE2 2063 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-205ENST00000550013 MAST4O15021 2626 aa15.54■□□□□ 0.08
RAB5C-205ENST00000550013 TSPAN11A1L157 253 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 AGRPO00253 132 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 BUB1BO60566 1050 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-205ENST00000550013 PCCBP05166 539 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
RAB5C-205ENST00000550013 LIG3P49916 1009 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 SUOXP51687 545 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 INHBCP55103 352 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 GSCP56915 257 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-205ENST00000550013 YBEYP58557 167 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-205ENST00000550013 TGIF1Q15583 401 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 UGP2Q16851 508 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 CLEC16AQ2KHT3 1053 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 PARP15Q460N3 678 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 GKN2Q86XP6 184 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 SFTPA2Q8IWL1 248 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 PLA2G15Q8NCC3 412 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 WDR92Q96MX6 357 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 SUV39H2Q9H5I1 410 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 UBA2Q9UBT2 640 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-205ENST00000550013 FZD10Q9ULW2 581 aa15.53■□□□□ 0.08
RAB5C-205ENST00000550013 HECTD1Q9ULT8 2610 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 WASH4PA8MWX3 477 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 J3KR12 359 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 NOBOXO60393 691 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 HTR1BP28222 390 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 MMP12P39900 470 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 KRT31Q15323 416 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 DNAAF5Q86Y56 855 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 PHF13Q86YI8 300 aaPredicted RBP15.52■□□□□ 0.08
RAB5C-205ENST00000550013 CAMK1DQ8IU85 385 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 CCNJLQ8IV13 435 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 Q8N9G6 341 aaPredicted RBP15.52■□□□□ 0.08
RAB5C-205ENST00000550013 EXD3Q8N9H8 876 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 C3orf20Q8ND61 904 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 HCAR2Q8TDS4 363 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 OR1E3Q8WZA6 343 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 RBM15Q96T37 977 aaKnown RBP eCLIP15.52■□□□□ 0.08
RAB5C-205ENST00000550013 STRADBQ9C0K7 418 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 LRRN3Q9H3W5 708 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 PDFQ9HBH1 243 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 PISDQ9UG56 409 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 SIK3Q9Y2K2 1263 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 PCDHGA7Q9Y5G6 932 aa15.52■□□□□ 0.08
RAB5C-205ENST00000550013 TLN1Q9Y490 2541 aaKnown RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 TCRBV5S1A1TA0A578 114 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 TMEM202A6NGA9 273 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 SIGLEC16A6NMB1 481 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 SLC28A2O43868 658 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 TNFP01375 233 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 CALB1P05937 261 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 CCKBRP32239 447 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 STAT1P42224 750 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 RGRP47804 291 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 ZNF143P52747 638 aaPredicted RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 RPL7AP62424 266 aaKnown RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 EIF3IQ13347 325 aaKnown RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 MTM1Q13496 603 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 AGERQ15109 404 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 CFAP58Q5T655 872 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 ERAP2Q6P179 960 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 DNAJC24Q6P3W2 148 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 MON1BQ7L1V2 547 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 GPR156Q8NFN8 814 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 CELF6Q96J87 481 aaKnown RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 MCEEQ96PE7 176 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 NUP62CLQ9H1M0 184 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 LRRC19Q9H756 370 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms