RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 MMP12P39900 470 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 MMP13P45452 471 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 LIG3P49916 1009 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 PFN3P60673 137 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 AP1S1P61966 158 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 DSC2Q02487 901 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 BCL2L1Q07817 233 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 ADCY2Q08462 1091 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 NSUN2Q08J23 767 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 NIPAL4Q0D2K0 466 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 OVGP1Q12889 678 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 EIF2B5Q13144 721 aaKnown RBP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 ZNF235Q14590 738 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 SUZ12Q15022 739 aaKnown RBP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 PDK2Q15119 407 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 TCEAL1Q15170 157 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 WSCD2Q2TBF2 565 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 KYAT3Q6YP21 454 aaKnown RBP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 RHOT2Q8IXI1 618 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 RBFAQ8N0V3 343 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 TEX26Q8N6G2 289 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 PLA2G15Q8NCC3 412 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 CXorf40AQ8TE69 158 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 LENG8Q96PV6 779 aaPredicted RBP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 NUDCD1Q96RS6 583 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 LGMNQ99538 433 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 ATP13A3Q9H7F0 1226 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 SCUBE2Q9NQ36 999 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 DNAJC28Q9NX36 388 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 DTLQ9NZJ0 730 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 SAE1Q9UBE0 346 aaPredicted RBP9.85□□□□□ -0.83
HDAC7-229ENST00000549883 INTUQ9ULD6 942 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 ATP8A1Q9Y2Q0 1164 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 FRYQ5TBA9 3013 aa9.85□□□□□ -0.83
HDAC7-229ENST00000549883 SPTY2D1-AS1A0A0U1RR47 76 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 FAM149AA5PLN7 773 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 KCNK1O00180 336 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 FPGTO14772 594 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 HTRA2O43464 458 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 SIGLEC6O43699 453 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 PIAS2O75928 621 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 HLA-DQB2P05538 268 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 PDHA1P08559 390 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 KRT10P13645 584 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CTPS1P17812 591 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 DGKAP23743 735 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 SERPINB6P35237 376 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ARHGAP25P42331 645 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 NOP2P46087 812 aaKnown RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ARRB1P49407 418 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 PDE1CQ14123 709 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 TCEA2Q15560 299 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CFAP58Q5T655 872 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 MARC1Q5VT66 337 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 BRAT1Q6PJG6 821 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 MFSD7Q6UXD7 560 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 LIPIQ6XZB0 460 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 RFLNAQ6ZTI6 216 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 TMEM139Q8IV31 216 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 SPC24Q8NBT2 197 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ACRBPQ8NEB7 543 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 HCAR2Q8TDS4 363 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ASB12Q8WXK4 309 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ADAMTS14Q8WXS8 1223 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 MAML1Q92585 1016 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 KRT35Q92764 455 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CNDP2Q96KP4 475 aaKnown RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CDC6Q99741 560 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 SEMA3CQ99985 751 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 CEP41Q9BYV8 373 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 LACRTQ9GZZ8 138 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 RBM22Q9NW64 420 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 B4GALT6Q9UBX8 382 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 FTSJ1Q9UET6 329 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 OR1A2Q9Y585 309 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 HEY1Q9Y5J3 304 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ALG6Q9Y672 507 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 EPN1Q9Y6I3 576 aaPredicted RBP9.84□□□□□ -0.83
HDAC7-229ENST00000549883 KNTC1P50748 2209 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 RP1P56715 2156 aa9.84□□□□□ -0.83
HDAC7-229ENST00000549883 ARHGEF17Q96PE2 2063 aaPredicted RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 NPIPB15A6NHN6 443 aaPredicted RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 K7ESM1 405 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ENC1O14682 589 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 MATN3O15232 486 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 CASC3O15234 703 aaKnown RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 TNFSF14O43557 240 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 SPOPO43791 374 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 MAGEC1O60732 1142 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 RECQL5O94762 991 aaPredicted RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 NDUFA10O95299 355 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 LDOC1O95751 146 aaPredicted RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 PCCBP05166 539 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 MMP2P08253 660 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ALPIP09923 528 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 PECAM1P16284 738 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms