RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 AARS2Q5JTZ9 985 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 NAPEPLDQ6IQ20 393 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 ESRP1Q6NXG1 681 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TMEM26Q6ZUK4 368 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 ZBTB46Q86UZ6 589 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 OFCC1Q8IZS5 231 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 LRRC52Q8N7C0 313 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TBC1D15Q8TC07 691 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 MROH8Q9H579 483 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 SLC2A6Q9UGQ3 507 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TRHDEQ9UKU6 1024 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TMEM221A6NGB7 291 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 A8MT66 165 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 AURKAO14965 403 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 DNAJB13P59910 316 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 RAB39AQ14964 217 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 CLEC6AQ6EIG7 209 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 SHCBP1Q8NEM2 672 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 ADAMTS16Q8TE57 1224 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 CELF6Q96J87 481 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 SNX27Q96L92 541 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 TEKT5Q96M29 485 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 CCM2LQ9NUG4 571 aaPredicted RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 EGFL7Q9UHF1 273 aa13.81□□□□□ -0.2
HDAC7-228ENST00000548938 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
HDAC7-228ENST00000548938 MCM3APO60318 1980 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 NME4O00746 187 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PORP16435 677 aaPredicted RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 TSPAN8P19075 237 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 TGFBIQ15582 683 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 INTS11Q5TA45 600 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 RWDD4Q6NW29 188 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PKN3Q6P5Z2 889 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 CYHR1Q6ZMK1 362 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 CAMK1DQ8IU85 385 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 SPPL2CQ8IUH8 684 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 FUNDC1Q8IVP5 155 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 BEST2Q8NFU1 509 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 CYGBQ8WWM9 190 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 VPS50Q96JG6 964 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 SNX25Q9H3E2 840 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 POLR1BQ9H9Y6 1135 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PFDN4Q9NQP4 134 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 IGSF5Q9NSI5 407 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 TRIM64A6NGJ6 449 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PDHXO00330 501 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 DNAJB1P25685 340 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 OXTRP30559 389 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 ARCN1P48444 511 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 GALNT2Q10471 571 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PSMD5Q16401 504 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 TECRLQ5HYJ1 363 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF484Q5JVG2 852 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 RBM20Q5T481 1227 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 OGFOD2Q6N063 350 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PACRGLQ8N7B6 248 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 BORCS5Q969J3 196 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PHF21BQ96EK2 531 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 FAR2Q96K12 515 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 COX4I2Q96KJ9 171 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 WDR6Q9NNW5 1121 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 AGPAT4Q9NRZ5 378 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 PAIP2BQ9ULR5 123 aaKnown RBP13.8□□□□□ -0.2
HDAC7-228ENST00000548938 OAZ3Q9UMX2 235 aa13.8□□□□□ -0.2
HDAC7-228ENST00000548938 RNF103-CHMP3A0A140T963 221 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 NCAM2O15394 837 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 FYNP06241 537 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 YBX1P67809 324 aaKnown RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 BNIP3Q12983 259 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 SLC36A3Q495N2 470 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 FBXO47Q5MNV8 452 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 HACD2Q6Y1H2 254 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 PLEKHA8Q96JA3 519 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 GINS2Q9Y248 185 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 UNCXA6NJT0 531 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 C9JVG2 144 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 NR5A2O00482 541 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 MTSS1O43312 755 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 IPO13O94829 963 aaKnown RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 ZBTB11O95625 1053 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms