RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 CTNNBL1Q8WYA6 563 aaPredicted RBP11.48□□□□□ -0.57
BEST3-209ENST00000548658 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 ECHDC3Q96DC8 303 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SLC13A1Q9BZW2 595 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 UCKL1Q9NWZ5 548 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 PLXNB3Q9ULL4 1909 aa11.48□□□□□ -0.57
BEST3-209ENST00000548658 SSU72P8A0A1W2PR75 194 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 K7ESM1 405 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 AQP9O43315 295 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 KRT7P08729 469 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 C6P13671 934 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 LIG3P49916 1009 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 SLC25A11Q02978 314 aaKnown RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 PPARDQ03181 441 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 SLC10A7Q0GE19 358 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 PDK2Q15119 407 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 ZNF542PQ5EBM4 170 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 LRRC73Q5JTD7 316 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 HES3Q5TGS1 186 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 MARC1Q5VT66 337 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 MACC1Q6ZN28 852 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 SDR16C5Q8N3Y7 309 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 ATPAF2Q8N5M1 289 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 TP53I13Q8NBR0 393 aaPredicted RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 ZNF548Q8NEK5 533 aaPredicted RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 ZNF564Q8TBZ8 553 aaPredicted RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 SCG3Q8WXD2 468 aaKnown RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 GLMNQ92990 594 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 NXPE2Q96DL1 559 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 APOLD1Q96LR9 279 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 ANP32EQ9BTT0 268 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 NRSN2Q9GZP1 204 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 ABCG4Q9H172 646 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 CTTNBP2NLQ9P2B4 639 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 CLCA2Q9UQC9 943 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 USP24Q9UPU5 2620 aa11.47□□□□□ -0.57
BEST3-209ENST00000548658 TDRD6O60522 2096 aaKnown RBP11.47□□□□□ -0.57
BEST3-209ENST00000548658 TRAFD1O14545 582 aaPredicted RBP11.46□□□□□ -0.57
BEST3-209ENST00000548658 AKR1B10O60218 316 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 MAFKO60675 156 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 SOCS5O75159 536 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 GIMD1P0DJR0 217 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 KRT10P13645 584 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 TCF4P15884 667 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 ITIH2P19823 946 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 CES1P23141 567 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 IGFALSP35858 605 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 MMP12P39900 470 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 RGRP47804 291 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 RPIAP49247 311 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 EIF2B5Q13144 721 aaKnown RBP11.46□□□□□ -0.57
BEST3-209ENST00000548658 TARDBPQ13148 414 aaKnown RBP eCLIP11.46□□□□□ -0.57
BEST3-209ENST00000548658 FAXCQ5TGI0 409 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 LVRNQ6Q4G3 990 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 ARHGAP36Q6ZRI8 547 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 FSTL5Q8N475 847 aaPredicted RBP11.46□□□□□ -0.57
BEST3-209ENST00000548658 KCTD6Q8NC69 237 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 TPCN2Q8NHX9 752 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 LMX1AQ8TE12 382 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 BTBD6Q96KE9 485 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 TSPY26PQ9H489 355 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
BEST3-209ENST00000548658 MBNL1Q9NR56 388 aaKnown RBP11.46□□□□□ -0.57
BEST3-209ENST00000548658 APOBEC3BQ9UH17 382 aaKnown RBP11.46□□□□□ -0.57
BEST3-209ENST00000548658 ASPMQ8IZT6 3477 aa11.46□□□□□ -0.58
BEST3-209ENST00000548658 LMO7DNF2Z398 122 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 TAF4O00268 1085 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 PDE2AO00408 941 aaPredicted RBP11.45□□□□□ -0.58
BEST3-209ENST00000548658 PROSCO94903 275 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 ANXA6P08133 673 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 ALPIP09923 528 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 ELFN1P0C7U0 828 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 CR2P20023 1033 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 KELP23276 732 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 IL4RP24394 825 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 MMP13P45452 471 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
BEST3-209ENST00000548658 CYP4F3Q08477 520 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 MTM1Q13496 603 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 INPP5AQ14642 412 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 IRF4Q15306 451 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 ELOCQ15369 112 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 WSCD2Q2TBF2 565 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 PRRT3Q5FWE3 981 aa11.45□□□□□ -0.58
BEST3-209ENST00000548658 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
BEST3-209ENST00000548658 PHACTR4Q8IZ21 702 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms