RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SNRNP25Q9BV90 132 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DUSP23Q9BVJ7 150 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 C1QTNF7Q9BXJ2 289 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 TCEAL2Q9H3H9 227 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 LRRC19Q9H756 370 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ZWILCHQ9H900 591 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PCDH12Q9NPG4 1184 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 SPASTQ9UBP0 616 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DKK3Q9UBP4 350 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 LHX3Q9UBR4 397 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ASPMQ8IZT6 3477 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 CEP192Q8TEP8 1941 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 KNL1Q8NG31 2342 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 A0A087WV48 116 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 A0A1B0GTH6 734 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 A0A1W2PQC6 194 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ARHGAP42A6NI28 874 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 A8MX80 341 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 WIPF1O43516 503 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 GCATO75600 419 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ANXA6P08133 673 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CTSEP14091 401 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ITPKBP27987 946 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 HTR7P34969 479 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 IGFALSP35858 605 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 EIF2S3P41091 472 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 RGRP47804 291 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 SCNN1BP51168 640 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 YPEL5P62699 121 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 PPARDQ03181 441 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ELP6Q0PNE2 266 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 INPP5AQ14642 412 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 GRM3Q14832 879 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 RTP5Q14D33 572 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 IQCB1Q15051 598 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 WSCD2Q2TBF2 565 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 TMEM52BQ4KMG9 183 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ERAP2Q6P179 960 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CRTC1Q6UUV9 634 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ENPP7Q6UWV6 458 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 LRRC69Q6ZNQ3 347 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ARHGAP36Q6ZRI8 547 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 EFL1Q7Z2Z2 1120 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 HID1Q8IV36 788 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ARHGAP12Q8IWW6 846 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 TP53INP2Q8IXH6 220 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 PHACTR4Q8IZ21 702 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 TP53I13Q8NBR0 393 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 DENND6BQ8NEG7 585 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 IFI44Q8TCB0 444 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 MAPK15Q8TD08 544 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 HCAR2Q8TDS4 363 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 RFFLQ8WZ73 363 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 HSPH1Q92598 858 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 TSACCQ96A04 125 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF641Q96N77 438 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CINPQ9BW66 212 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 EDEM3Q9BZQ6 932 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 SLC13A1Q9BZW2 595 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 SP110Q9HB58 689 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 PDFQ9HBH1 243 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 MRPL47Q9HD33 250 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CWC15Q9P013 229 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 APOBEC3BQ9UH17 382 aaKnown RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 PNMA8BQ9ULN7 279 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-211ENST00000547950 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 PCDHB1Q9Y5F3 818 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 CSNK1G3Q9Y6M4 447 aa6.76□□□□□ -1.33
SCAF11-211ENST00000547950 LY6G6EA0A0G2JKS1 128 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 SYCE3A1L190 88 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TMEM110-MUSTN1A8MSY1 372 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 EIF3CLB5ME19 914 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 H3BRJ5 948 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TPP1O14773 563 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 MUSKO15146 869 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 YY2O15391 372 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 RRP8O43159 456 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TLX3O43711 291 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 BRINP1O60477 761 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 USP12O75317 370 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 CSO75390 466 aaKnown RBP6.75□□□□□ -1.33
SCAF11-211ENST00000547950 LRCH4O75427 683 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 MPOP05164 745 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 PCCBP05166 539 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 GP1BAP07359 652 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 MYBL1P10243 752 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 C6P13671 934 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TCF4P15884 667 aa6.75□□□□□ -1.33
SCAF11-211ENST00000547950 TSHRP16473 764 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms