RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-210ENST00000547555 SPRED2Q7Z698 418 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 DCLK2Q8N568 766 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 SHKBP1Q8TBC3 707 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 BCL7CQ8WUZ0 217 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-210ENST00000547555 ZUFSPQ96AP4 578 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 TIFAQ96CG3 184 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 DNAJC1Q96KC8 554 aaKnown RBP17.21■□□□□ 0.35
LETMD1-210ENST00000547555 ZNF560Q96MR9 790 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 RANBP9Q96S59 729 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 MCMBPQ9BTE3 642 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 GATA5Q9BWX5 397 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-210ENST00000547555 NT5C1AQ9BXI3 368 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 BFARQ9NZS9 450 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 NXF1Q9UBU9 619 aaKnown RBP17.21■□□□□ 0.35
LETMD1-210ENST00000547555 B3GNT3Q9Y2A9 372 aa17.21■□□□□ 0.35
LETMD1-210ENST00000547555 CHD7Q9P2D1 2997 aa17.21■□□□□ 0.34
LETMD1-210ENST00000547555 NCAM2O15394 837 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SORBS2O94875 1100 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ITGB1P05556 798 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 RB1P06400 928 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 IGFBP6P24592 240 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CTNNB1P35222 781 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ARL4AP40617 200 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 RPL34P49207 117 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ATP4BP51164 291 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SCNN1BP51168 640 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 NSUN2Q08J23 767 aaKnown RBP eCLIP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 GALNT1Q10472 559 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 UGP2Q16851 508 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 PKDCCQ504Y2 493 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 C6orf52Q5T4I8 152 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 PPP2R2DQ66LE6 453 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SCARA5Q6ZMJ2 495 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SLC26A9Q7LBE3 791 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ANKRD52Q8NB46 1076 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 IGSF21Q96ID5 467 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 COX4I2Q96KJ9 171 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 OR52B2Q96RD2 323 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 C17orf80Q9BSJ5 609 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 TRIM15Q9C019 465 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 OLAHQ9NV23 265 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 RHBDL2Q9NX52 303 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SPG21Q9NZD8 308 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 A0A096LPK6 155 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 NT5C1B-RDH14C9J2C7 533 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 PSMD3O43242 534 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ATP6V1G1O75348 118 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 KRT19P08727 400 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ZNF135P52742 658 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 LILRA4P59901 499 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 DNAJB13P59910 316 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CDKL1Q00532 357 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CBX3Q13185 183 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 PPP2R5DQ14738 602 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ANO4Q32M45 955 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SAMD4BQ5PRF9 694 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 VWA5B1Q5TIE3 1220 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 FAM45BPQ6NSW5 357 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 TRNP1Q6NT89 227 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CHSY3Q70JA7 882 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 GPR180Q86V85 440 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 FAM45AQ8TCE6 357 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 RCN3Q96D15 328 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CCDC126Q96EE4 140 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 HEXIM2Q96MH2 286 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 TDRD1Q9BXT4 1180 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 MUC13Q9H3R2 512 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 MAGEE1Q9HCI5 957 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 NGRNQ9NPE2 291 aaKnown RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 GIN1Q9NXP7 522 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 DTLQ9NZJ0 730 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.2■□□□□ 0.34
LETMD1-210ENST00000547555 RNF11Q9Y3C5 154 aa17.2■□□□□ 0.34
LETMD1-210ENST00000547555 ATG2AQ2TAZ0 1938 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 TMEM265A0A087WTH1 108 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 SPTLC1O15269 473 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 RNASEH2AO75792 299 aaKnown RBP17.19■□□□□ 0.34
LETMD1-210ENST00000547555 VAPBO95292 243 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 MYF6P23409 242 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 ACADSBP45954 432 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 TAF6P49848 677 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 ERFP50548 548 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 GALK1P51570 392 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 AIF1P55008 147 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 MS4A2Q01362 244 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 GRSF1Q12849 480 aaKnown RBP eCLIP17.19■□□□□ 0.34
LETMD1-210ENST00000547555 SQLEQ14534 574 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 C15orf59Q2T9L4 293 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-210ENST00000547555 SV2CQ496J9 727 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 INTS6LQ5JSJ4 861 aaKnown RBP17.19■□□□□ 0.34
LETMD1-210ENST00000547555 PIWIL4Q7Z3Z4 852 aaKnown RBP17.19■□□□□ 0.34
LETMD1-210ENST00000547555 AMIGO2Q86SJ2 522 aa17.19■□□□□ 0.34
LETMD1-210ENST00000547555 CAMK1DQ8IU85 385 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms