RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 WEE2P0C1S8 567 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 CFC1P0CG37 223 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 BLKP51451 505 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF155Q12901 538 aaPredicted RBP4.19□□□□□ -1.74
CCDC38-204ENST00000546816 EFNB3Q15768 340 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 PDCD2Q16342 344 aaPredicted RBP4.19□□□□□ -1.74
CCDC38-204ENST00000546816 ZC3HC1Q86WB0 502 aaKnown RBP4.19□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF441Q8N8Z8 693 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 CREB3L4Q8TEY5 395 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 CNOT9Q92600 299 aaKnown RBP4.19□□□□□ -1.74
CCDC38-204ENST00000546816 ERGIC1Q969X5 290 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 MTBPQ96DY7 904 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 COG8Q96MW5 612 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 UHRF2Q96PU4 802 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 OR1F2PQ96R84 312 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 EPYCQ99645 322 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 MMTAG2Q9BU76 263 aaKnown RBP4.19□□□□□ -1.74
CCDC38-204ENST00000546816 EPHX3Q9H6B9 360 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 NOD2Q9HC29 1040 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 NOX4Q9NPH5 578 aa4.19□□□□□ -1.74
CCDC38-204ENST00000546816 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ARHGAP10A1A4S6 786 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 TYW5A2RUC4 315 aaKnown RBP4.18□□□□□ -1.74
CCDC38-204ENST00000546816 HSPB2A8KAH6 182 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ZIC3O60481 467 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 LINC00271P0C7V0 271 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF8P17098 575 aaPredicted RBP4.18□□□□□ -1.74
CCDC38-204ENST00000546816 DGKAP23743 735 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF132P52740 706 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 HDAC4P56524 1084 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ECT2LQ008S8 904 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 OASLQ15646 514 aaKnown RBP4.18□□□□□ -1.74
CCDC38-204ENST00000546816 HSPB2Q16082 182 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 EDRF1Q3B7T1 1238 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ADCK5Q3MIX3 580 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ANO1Q5XXA6 986 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 CES5AQ6NT32 575 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 SATL1Q86VE3 508 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 SPATA22Q8NHS9 363 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 CD101Q93033 1021 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 TBC1D20Q96BZ9 403 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 TWNKQ96RR1 684 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 MMP28Q9H239 520 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ITM2CQ9NQX7 267 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 GAB2Q9UQC2 676 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 NFE2L3Q9Y4A8 694 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 A3GALT2U3KPV4 340 aa4.18□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF587BE7ETH6 402 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 PEX12O00623 359 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 KLK10O43240 276 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 KLK8O60259 260 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 PTPN2P17706 415 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 GRK6P43250 576 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 TRAPPC10P48553 1259 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 NR1H2P55055 460 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 CLDN2P57739 230 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 ZBTB17Q13105 803 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 ARHGEF6Q15052 776 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 C10orf62Q5T681 223 aaPredicted RBP4.17□□□□□ -1.74
CCDC38-204ENST00000546816 SPEM1Q8N4L4 309 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 PARP16Q8N5Y8 322 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 USP38Q8NB14 1042 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 GJC3Q8NFK1 279 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 SECTM1Q8WVN6 248 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 C3orf30Q96M34 536 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 MROH8Q9H579 483 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 SUFUQ9UMX1 484 aa4.17□□□□□ -1.74
CCDC38-204ENST00000546816 ANTXRLA6NF34 631 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 MID1O15344 667 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 NDUFS7O75251 213 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 HNRNPH1P31943 449 aaKnown RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 RHBDL3P58872 404 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 NLRP5P59047 1200 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 TROAPQ12815 778 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 DMP1Q13316 513 aaPredicted RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 EFR3AQ14156 821 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 RBBP5Q15291 538 aaKnown RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 ANKRD1Q15327 319 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 FCN2Q15485 313 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 AMZ1Q400G9 498 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 ANKRD45Q5TZF3 282 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 FOXL2NBQ6ZUU3 175 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 MARK2Q7KZI7 788 aaKnown RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 TBC1D26Q86UD7 250 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 C2CD5Q86YS7 1000 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 LSM14AQ8ND56 463 aaKnown RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 CTCFLQ8NI51 663 aaPredicted RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 STAMQ92783 540 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 TANKQ92844 425 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 PHF7Q9BWX1 381 aaPredicted RBP4.16□□□□□ -1.74
CCDC38-204ENST00000546816 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 LRRC4Q9HBW1 653 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 ZNF224Q9NZL3 707 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 CDC14AQ9UNH5 594 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 PCDHAC2Q9Y5I4 1007 aa4.16□□□□□ -1.74
CCDC38-204ENST00000546816 SOCS6O14544 535 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 NDUFB4O95168 129 aa4.15□□□□□ -1.75
CCDC38-204ENST00000546816 SRCP12931 536 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms