RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TDRD1Q9BXT4 1180 aaKnown RBP16.92■□□□□ 0.3
CCDC38-203ENST00000546803 SLC17A9Q9BYT1 436 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 EBF2Q9HAK2 575 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 USP29Q9HBJ7 922 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 CAPN10Q9HC96 672 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 TM9SF3Q9HD45 589 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 R3HDM2Q9Y2K5 976 aaKnown RBP16.92■□□□□ 0.3
CCDC38-203ENST00000546803 ZKSCAN5Q9Y2L8 839 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 IGLON5A6NGN9 336 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 PRAMEF26H0Y7S4 382 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 KCNN4O15554 427 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 CEP104O60308 925 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 ITIH2P19823 946 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 HNRNPA2B1P22626 353 aaKnown RBP16.91■□□□□ 0.3
CCDC38-203ENST00000546803 AKT2P31751 481 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 CD68P34810 354 aaPredicted RBP16.91■□□□□ 0.3
CCDC38-203ENST00000546803 MMP12P39900 470 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 GRIA4P48058 902 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 FAM193AP78312 1265 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 SGCGQ13326 291 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 IHHQ14623 411 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 ITPRIPL1Q6GPH6 555 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 USP45Q70EL2 814 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 PIH1D2Q8WWB5 315 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 SKA1Q96BD8 255 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 SCRN2Q96FV2 425 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 FCRL5Q96RD9 977 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 ADGRE3Q9BY15 652 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 SMOC1Q9H4F8 434 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 PCDH9Q9HC56 1237 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 GGT7Q9UJ14 662 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 CHKBQ9Y259 395 aa16.91■□□□□ 0.3
CCDC38-203ENST00000546803 ABCA7Q8IZY2 2146 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 SLC31A1O15431 190 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 OPHN1O60890 802 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 TM7SF2O76062 418 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 FGGP02679 453 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 SYPP08247 313 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 PDHA1P08559 390 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 CYP2A6P11509 494 aaPredicted RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 STIP1P31948 543 aaKnown RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 CXCR5P32302 372 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 EPHB1P54762 984 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 IRX4P78413 519 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 LMNB2Q03252 620 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 OVGP1Q12889 678 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 STAT4Q14765 748 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 SF3A2Q15428 464 aaKnown RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 DPPA4Q7L190 304 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 FAM174AQ8TBP5 190 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 SLC6A18Q96N87 628 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 MCCC1Q96RQ3 725 aaPredicted RBP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 RBM15Q96T37 977 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC38-203ENST00000546803 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 C10orf88Q9H8K7 445 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 AASDHPPTQ9NRN7 309 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 FAM153AQ9UHL3 310 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 DNPEPQ9ULA0 475 aa16.9■□□□□ 0.3
CCDC38-203ENST00000546803 C5orf60A6NFR6 353 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 VILLO15195 856 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 LIASO43766 372 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 MMP20O60882 483 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 PAK4O96013 591 aaPredicted RBP16.89■□□□□ 0.29
CCDC38-203ENST00000546803 PRLP01236 227 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 ATP1A1P05023 1023 aaKnown RBP16.89■□□□□ 0.29
CCDC38-203ENST00000546803 PRKCGP05129 697 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 PRLRP16471 622 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 NFKB1P19838 968 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 CD38P28907 300 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 VIPR1P32241 457 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 LIG3P49916 1009 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 GNG11P61952 73 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 RALGDSQ12967 914 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 FGL2Q14314 439 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 CCNG2Q16589 344 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 LONRF2Q1L5Z9 754 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 ANKRD20A2Q5SQ80 823 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 ANKRD20A1Q5TYW2 823 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 ANKRD20A3Q5VUR7 823 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 TCEAL6Q6IPX3 200 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 ADAT2Q7Z6V5 191 aaKnown RBP16.89■□□□□ 0.29
CCDC38-203ENST00000546803 IQCHQ86VS3 1027 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 RASGEF1CQ8N431 466 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 MFSD2AQ8NA29 543 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 DENND6BQ8NEG7 585 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 KLK6Q92876 244 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 TCEAL3Q969E4 200 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 PPP1R2P1Q96PQ5 205 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 WRAP53Q9BUR4 548 aaKnown RBP16.89■□□□□ 0.29
CCDC38-203ENST00000546803 GBA3Q9H227 469 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 HOMER3Q9NSC5 361 aa16.89■□□□□ 0.29
CCDC38-203ENST00000546803 B4GALT6Q9UBX8 382 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms