RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CFAP69A5D8W1 941 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 TNFRSF10CO14798 259 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 KDELR3O43731 214 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 CPNE6O95741 557 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 FGF3P11487 239 aaPredicted RBP14.85□□□□□ -0.03
RTN3-214ENST00000545432 RHOQP17081 205 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 SLC9A1P19634 815 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 CLCN1P35523 988 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 TRIM23P36406 574 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 FLT3P36888 993 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 KIAA1024LP59773 190 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 PTK2Q05397 1052 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 ELP6Q0PNE2 266 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 MTM1Q13496 603 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 INO80DQ53TQ3 878 aaPredicted RBP14.85□□□□□ -0.03
RTN3-214ENST00000545432 SFTPA2Q8IWL1 248 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 CASKIN2Q8WXE0 1202 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 PDXPQ96GD0 296 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 WDR92Q96MX6 357 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 KLQ9UEF7 1012 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 LRP4O75096 1905 aa14.85□□□□□ -0.03
RTN3-214ENST00000545432 CREBBPQ92793 2442 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 BICDL2A1A5D9 508 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 ZSCAN5CA6NGD5 496 aaPredicted RBP14.84□□□□□ -0.03
RTN3-214ENST00000545432 CAPN5O15484 640 aaPredicted RBP14.84□□□□□ -0.03
RTN3-214ENST00000545432 UGT1A3P35503 534 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 KRT9P35527 623 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 CCR10P46092 362 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 RNASE9P60153 205 aaKnown RBP14.84□□□□□ -0.03
RTN3-214ENST00000545432 RAD51Q06609 339 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 TRA2AQ13595 282 aaKnown RBP eCLIP14.84□□□□□ -0.03
RTN3-214ENST00000545432 C4orf17Q53FE4 359 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 LRRC73Q5JTD7 316 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 ATXN7L2Q5T6C5 722 aaPredicted RBP14.84□□□□□ -0.03
RTN3-214ENST00000545432 PIM3Q86V86 326 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 XYLT1Q86Y38 959 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 DRC7Q8IY82 874 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 RYBPQ8N488 228 aaPredicted RBP14.84□□□□□ -0.03
RTN3-214ENST00000545432 OR1E3Q8WZA6 343 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 MIB2Q96AX9 1013 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 SLC45A3Q96JT2 553 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 GDAP1L1Q96MZ0 367 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 DDA1Q9BW61 102 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
RTN3-214ENST00000545432 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.03
RTN3-214ENST00000545432 IGHV5-10-1A0A0J9YXX1 117 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 GTPBP10A4D1E9 387 aaKnown RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 TMEM202A6NGA9 273 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 HSP90AA1P07900 732 aaKnown RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 LIFP15018 202 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 ADRA1BP35368 520 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 NCAPHQ15003 741 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 UGP2Q16851 508 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 ARHGAP44Q17R89 818 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 CRTC2Q53ET0 693 aaPredicted RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 RD3Q7Z3Z2 195 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 FAM131BQ86XD5 332 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 HSCBQ8IWL3 235 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 FAM46DQ8NEK8 389 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 OR56A4Q8NGH8 313 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 NELFBQ8WX92 580 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 C18orf8Q96DM3 657 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 WRAP53Q9BUR4 548 aaKnown RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 NOL6Q9H6R4 1146 aaKnown RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
RTN3-214ENST00000545432 OR12D3Q9UGF7 316 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 MAN1B1Q9UKM7 699 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 COQ6Q9Y2Z9 468 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 OR1A2Q9Y585 309 aa14.83□□□□□ -0.04
RTN3-214ENST00000545432 ZNF891A8MT65 544 aaPredicted RBP14.82□□□□□ -0.04
RTN3-214ENST00000545432 FOXN3O00409 490 aaPredicted RBP14.82□□□□□ -0.04
RTN3-214ENST00000545432 TMCC1O94876 653 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 CD1CP29017 333 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 LIMK2P53671 638 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 APBA1Q02410 837 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 ARHGEF7Q14155 803 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 PHF19Q5T6S3 580 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 SPECC1LQ69YQ0 1117 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 TAF8Q7Z7C8 310 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 SLC47A2Q86VL8 602 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 FAM71AQ8IYT1 594 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 PLA2G15Q8NCC3 412 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 TMEM35BQ8NCS4 154 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 PMEPA1Q969W9 287 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 FUBP1Q96AE4 644 aaKnown RBP14.82□□□□□ -0.04
RTN3-214ENST00000545432 HMCESQ96FZ2 354 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 SYNCQ9H7C4 482 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 RDH14Q9HBH5 336 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 FGF22Q9HCT0 170 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 SIX2Q9NPC8 291 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 PDP2Q9P2J9 529 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 HPCAL4Q9UM19 191 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
RTN3-214ENST00000545432 BLACEA4D250 179 aa14.81□□□□□ -0.04
RTN3-214ENST00000545432 FAM72CH0Y354 149 aa14.81□□□□□ -0.04
RTN3-214ENST00000545432 PON1P27169 355 aa14.81□□□□□ -0.04
RTN3-214ENST00000545432 MMP12P39900 470 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms