RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ZNF235	Q14590	738 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ATP13A4	Q4VNC1	1196 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ANKRD20A8P	Q5CZ79	823 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	LRRC73	Q5JTD7	316 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	NCBP2-AS2	Q69YL0	99 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ALG1L	Q6GMV1	187 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	DPPA4	Q7L190	304 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	TMPRSS12	Q86WS5	348 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	CPNE8	Q86YQ8	564 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	CACTIN-AS1	Q8N1I8	211 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	BBS5	Q8N3I7	341 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	PGBD5	Q8N414	524 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	FAM181A	Q8N9Y4	354 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	SLC35G2	Q8TBE7	412 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	RFFL	Q8WZ73	363 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	MAML1	Q92585	1016 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	TSGA13	Q96PP4	275 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	NLGN3	Q9NZ94	848 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	AMACR	Q9UHK6	382 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	NEMP2	A6NFY4	417 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	TMEM110-MUSTN1	A8MSY1	372 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015		H3BM21	787 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	TRIM38	O00635	465 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	SDC3	O75056	442 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	RFPL3	O75679	317 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	C6	P13671	934 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	GARS	P41250	739 aa	Known RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	SCNN1B	P51168	640 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	HADHB	P55084	474 aa	Known RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	EIF2B5	Q13144	721 aa	Known RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	WSCD2	Q2TBF2	565 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	TPRG1L	Q5T0D9	272 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	CFAP58	Q5T655	872 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	MARC1	Q5VT66	337 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	LRRC38	Q5VT99	294 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	MACC1	Q6ZN28	852 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	CBARP	Q8N350	705 aa	Predicted RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	TC2N	Q8N9U0	490 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	KCTD6	Q8NC69	237 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	NSMCE1	Q8WV22	266 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	BTN2A2	Q8WVV5	523 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	WRAP53	Q9BUR4	548 aa	Known RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	DUSP23	Q9BVJ7	150 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	USP29	Q9HBJ7	922 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	MBNL1	Q9NR56	388 aa	Known RBP	13.49	□□□□□ -0.25
POLE-222	ENST00000545015	SPTLC3	Q9NUV7	552 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	UCKL1	Q9NWZ5	548 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	DKK4	Q9UBT3	224 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	PPIL1	Q9Y3C6	166 aa		13.49	□□□□□ -0.25
POLE-222	ENST00000545015	AKAP13	Q12802	2813 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	ASPM	Q8IZT6	3477 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	TPP1	O14773	563 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	MATN3	O15232	486 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	SIGLEC6	O43699	453 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	MFSD11	O43934	449 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	LCA5L	O95447	670 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	ALPPL2	P10696	532 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	MX2	P20592	715 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	CES1	P23141	567 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	KDELR1	P24390	212 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	CCNC	P24863	283 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	SLC1A1	P43005	524 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	SSR1	P43307	286 aa	Known RBP	13.48	□□□□□ -0.25
POLE-222	ENST00000545015	MMP13	P45452	471 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	LIG3	P49916	1009 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	DNAJC3	Q13217	504 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	CAMK2B	Q13554	666 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	LRRC14	Q15048	493 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	IRF4	Q15306	451 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	IFI16	Q16666	785 aa	Known RBP	13.48	□□□□□ -0.25
POLE-222	ENST00000545015	TIGD7	Q6NT04	549 aa	Predicted RBP	13.48	□□□□□ -0.25
POLE-222	ENST00000545015	LIPI	Q6XZB0	460 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	PQLC3	Q8N755	202 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	RNF157	Q96PX1	679 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	TRIM5	Q9C035	493 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	NOD2	Q9HC29	1040 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	DNAJC28	Q9NX36	388 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	KCTD5	Q9NXV2	234 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	KLF15	Q9UIH9	416 aa		13.48	□□□□□ -0.25
POLE-222	ENST00000545015	C3orf70	A6NLC5	250 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-222	ENST00000545015	HOXC4	P09017	264 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-222	ENST00000545015	CKMT1A	P12532	417 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	GM2A	P17900	193 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	THOP1	P52888	689 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	MTM1	Q13496	603 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	MESD	Q14696	234 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	DHRS13	Q6UX07	377 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	CCDC170	Q8IYT3	715 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-222	ENST00000545015	RAPGEF5	Q92565	580 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	HDAC11	Q96DB2	347 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	MRFAP1L1	Q96HT8	127 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-222	ENST00000545015	SCUBE2	Q9NQ36	999 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	SALL4	Q9UJQ4	1053 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.47	□□□□□ -0.25
POLE-222	ENST00000545015	PHTF1	Q9UMS5	762 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	CACNA1B	Q00975	2339 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	IGF2R	P11717	2491 aa		13.47	□□□□□ -0.25
POLE-222	ENST00000545015	LY6G6E	A0A0G2JKS1	128 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms