RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 SERPINA1P01009 418 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 LSM12Q3MHD2 195 aaKnown RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 AP3S1Q92572 193 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 MCMBPQ9BTE3 642 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PGRMC2O15173 223 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 FAM151BQ6UXP7 276 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 POC5Q8NA72 575 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PANX1Q96RD7 426 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 FZD1Q9UP38 647 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 SERPINB7O75635 380 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 CCNDBP1O95273 360 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 MNDAP41218 407 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PCID2Q5JVF3 399 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 DEPDC4Q8N2C3 294 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 NKAPQ8N5F7 415 aaKnown RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 PTGR2Q8N8N7 351 aaPredicted RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 VANGL1Q8TAA9 524 aaPredicted RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 ZBTB45Q96K62 511 aaPredicted RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 DDX20Q9UHI6 824 aaKnown RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 IKZF2Q9UKS7 526 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PIRTP0C851 137 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 MC1RQ01726 317 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 ITPK1Q13572 414 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PARP6Q2NL67 630 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PLEKHG4BQ96PX9 1271 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PLAGL2Q9UPG8 496 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 TRBV23OR9-2A0A075B6M9 112 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 CCNB1P14635 433 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PHYKPLQ8IUZ5 450 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 ALLCQ8N6M5 410 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 GSDMCQ9BYG8 508 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 PHF24Q9UPV7 400 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 SPATA31A1Q5TZJ5 1347 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 SLC7A2P52569 658 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 DCTN2Q13561 401 aaKnown RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 C12orf50Q8NA57 414 aaPredicted RBP20.13■□□□□ 0.81
BPTF-208ENST00000544778 FNIP1Q8TF40 1166 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 ZYG11BQ9C0D3 744 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 ATG10Q9H0Y0 220 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
BPTF-208ENST00000544778 A0A075B6Q4 140 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 ZMPSTE24O75844 475 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 CXCL14O95715 111 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 TRIM28Q13263 835 aaKnown RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 DPYSL3Q14195 570 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 ZNF697Q5TEC3 545 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 NEPROQ6NW34 567 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 PSRC1Q6PGN9 363 aaPredicted RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 SNX20Q7Z614 316 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 FAM129CQ86XR2 697 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 PIH1D2Q8WWB5 315 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 TBC1D24Q9ULP9 559 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 WASHC2DQ5SRD0 308 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 SPATA6LQ8N4H0 392 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 RELTQ969Z4 430 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 MCCC2Q9HCC0 563 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 SEC24AO95486 1093 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 C9P02748 559 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 SLC26A3P40879 764 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 ACTR3P61158 418 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 UBR7Q8N806 425 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 C18orf25Q96B23 403 aaPredicted RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 ULK1O75385 1050 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 SNRPB2P08579 225 aaKnown RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 PTENP60484 403 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 PERM1Q5SV97 790 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 KYAT3Q6YP21 454 aaKnown RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 CD101Q93033 1021 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 CHKAP35790 457 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 C15orf59Q2T9L4 293 aaPredicted RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 CXorf57Q6NSI4 855 aaKnown RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 RTL4Q6ZR62 310 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 PCDHGC5Q9Y5F6 944 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 ADH1CP00326 375 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 S100A6P06703 90 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 MNTQ99583 582 aa20.12■□□□□ 0.81
BPTF-208ENST00000544778 SAMHD1Q9Y3Z3 626 aaKnown RBP20.12■□□□□ 0.81
BPTF-208ENST00000544778 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.11■□□□□ 0.818e-10■■■□□ 18.6
BPTF-208ENST00000544778 MAB21L3Q8N8X9 362 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 RASGEF1AQ8N9B8 481 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 CHST4Q8NCG5 386 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 CDCA5Q96FF9 252 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 AARSD1Q9BTE6 412 aaKnown RBP20.11■□□□□ 0.81
BPTF-208ENST00000544778 GLI2P10070 1586 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 FFAR2O15552 330 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 NAB1Q13506 487 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 SQLEQ14534 574 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 MSANTD1Q6ZTZ1 278 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 MTF2Q9Y483 593 aaPredicted RBP20.11■□□□□ 0.81
BPTF-208ENST00000544778 PCDHGB3Q9Y5G1 929 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 CXCL17Q6UXB2 119 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 ITCHQ96J02 903 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 CTDNEP1O95476 244 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 PECAM1P16284 738 aaPredicted RBP20.11■□□□□ 0.81
BPTF-208ENST00000544778 CDH5P33151 784 aaPredicted RBP20.11■□□□□ 0.81
BPTF-208ENST00000544778 NOS2P35228 1153 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 TRIM40Q6P9F5 258 aa20.11■□□□□ 0.81
BPTF-208ENST00000544778 SPESP1Q6UW49 350 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms