RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	CCDC166	P0CW27	439 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	PGF	P49763	221 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	CLCN2	P51788	898 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	YWHAH	Q04917	246 aa	Predicted RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	GALNT1	Q10472	559 aa	Predicted RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC14A2	Q15849	920 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	HECTD2	Q5U5R9	776 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MARC1	Q5VT66	337 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MSANTD2	Q6P1R3	559 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MARVELD2	Q8N4S9	558 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SPPL2B	Q8TCT7	592 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TMA16	Q96EY4	203 aa	Known RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	GCNA	Q96QF7	691 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NDN	Q99608	321 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SH3GL3	Q99963	347 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NMUR1	Q9HB89	426 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	CYP4F12	Q9HCS2	524 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	EPS15L1	Q9UBC2	864 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NEMP2	A6NFY4	417 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	FAM155A	B1AL88	458 aa	Predicted RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TNPO2	O14787	897 aa	Known RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	AURKA	O14965	403 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	UBD	O15205	165 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	GPC4	O75487	556 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	CD86	P42081	329 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	HSPA13	P48723	471 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	HUNK	P57058	714 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TBX4	P57082	545 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	PSME3	P61289	254 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MS4A2	Q01362	244 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	PTK2B	Q14289	1009 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NOMO2	Q5JPE7	1267 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	PIK3R6	Q5UE93	754 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	UGT2A3	Q6UWM9	527 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	C17orf99	Q6UX52	265 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	GK5	Q6ZS86	529 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	CUZD1	Q86UP6	607 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MON1A	Q86VX9	555 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	DCP1B	Q8IZD4	617 aa	Known RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TRPV1	Q8NER1	839 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	ADAM2	Q99965	735 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TRMO	Q9BU70	441 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	ZYG11B	Q9C0D3	744 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	MFSD1	Q9H3U5	465 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NOL6	Q9H6R4	1146 aa	Known RBP	13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SP110	Q9HB58	689 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	ADA2	Q9NZK5	511 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	HACD3	Q9P035	362 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	RIMS3	Q9UJD0	308 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NUDT5	Q9UKK9	219 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	SCML2	Q9UQR0	700 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	TBC1D30	Q9Y2I9	924 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	VWA7	Q9Y334	891 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	FIS1	Q9Y3D6	152 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	DOCK3	Q8IZD9	2030 aa		13.56	□□□□□ -0.24
PPME1-208	ENST00000543525	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	PEX11B	O96011	259 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	PENK	P01210	267 aa	Predicted RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC26A3	P40879	764 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	DPP6	P42658	865 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC39A12	Q504Y0	691 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	ZNF789	Q5FWF6	425 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	ZNF280D	Q6N043	979 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	HMCES	Q96FZ2	354 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC39A13	Q96H72	371 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SPATA16	Q9BXB7	569 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	UPF3A	Q9H1J1	476 aa	Known RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	TMEM248	Q9NWD8	314 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	RNF186	Q9NXI6	227 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	NDUFA13	Q9P0J0	144 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	MRPL42	Q9Y6G3	142 aa	Known RBP	13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	SLC4A7	Q9Y6M7	1214 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	MYLK	Q15746	1914 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	PTPRD	P23468	1912 aa		13.55	□□□□□ -0.24
PPME1-208	ENST00000543525	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	PRSS51	A0A1B0GVH4	220 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	EME2	A4GXA9	379 aa	Predicted RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	MANSC4	A6NHS7	340 aa	Predicted RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	STX16-NPEPL1	H3BU86	382 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	PSMD12	O00232	456 aa	Predicted RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	ACOT8	O14734	319 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	IMPDH1	P20839	514 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	PSMD8	P48556	350 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	INHBC	P55103	352 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	PDAP1	Q13442	181 aa	Known RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	FASTK	Q14296	549 aa	Known RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	CNPY1	Q3B7I2	92 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	RGMB	Q6NW40	437 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	FBXL19	Q6PCT2	694 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	ARPIN	Q7Z6K5	226 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	SPATA24	Q86W54	205 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	CILP2	Q8IUL8	1156 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	NUP93	Q8N1F7	819 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	RNF148	Q8N7C7	305 aa		13.54	□□□□□ -0.24
PPME1-208	ENST00000543525	ATP6V0D2	Q8N8Y2	350 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms