RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 EIF2S3P41091 472 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 RGRP47804 291 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 RPIAP49247 311 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 RENBPP51606 427 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 PPARDQ03181 441 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 MTM1Q13496 603 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 PIGHQ14442 188 aaPredicted RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 NFATC4Q14934 902 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 NR0B2Q15466 257 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 TBC1D25Q3MII6 688 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 BOLA3Q53S33 107 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 TDRD12Q587J7 1177 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 PRRT3Q5FWE3 981 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 HGSNATQ68CP4 663 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 KDM7AQ6ZMT4 941 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 RBFAQ8N0V3 343 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 NIPA2Q8N8Q9 360 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 TSEN2Q8NCE0 465 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 TPCN2Q8NHX9 752 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 WDR48Q8TAF3 677 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 MAPK15Q8TD08 544 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 NAT6Q93015 286 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 GRAMD1AQ96CP6 724 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 PSKH2Q96QS6 385 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 CAAP1Q9H8G2 361 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 CWC15Q9P013 229 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 SEPT3Q9UH03 358 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 A0A1W2PQ67 120 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 DFFAO00273 331 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 RRP8O43159 456 aaKnown RBP15.74■□□□□ 0.11
VPS33A-206ENST00000542310 BUB1BO60566 1050 aaPredicted RBP15.74■□□□□ 0.11
VPS33A-206ENST00000542310 TCEA3O75764 348 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 DXOO77932 396 aaKnown RBP15.74■□□□□ 0.11
VPS33A-206ENST00000542310 ANXA6P08133 673 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 ITIH2P19823 946 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 HTR1BP28222 390 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 LIG3P49916 1009 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 SEMG2Q02383 582 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 BCL2L1Q07817 233 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 WSCD2Q2TBF2 565 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 DEFB133Q30KQ1 61 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 LRRC69Q6ZNQ3 347 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 ZSWIM9Q86XI8 627 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 CAMK1DQ8IU85 385 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 TEKT4Q8WW24 435 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 MYO1AQ9UBC5 1043 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 PNMA8BQ9ULN7 279 aaPredicted RBP15.74■□□□□ 0.11
VPS33A-206ENST00000542310 COQ6Q9Y2Z9 468 aa15.74■□□□□ 0.11
VPS33A-206ENST00000542310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 TRAFD1O14545 582 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 SOCS5O75159 536 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 CSO75390 466 aaKnown RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 GCATO75600 419 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 RASGRP1O95267 797 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 ALPIP09923 528 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 SKILP12757 684 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 IL1R2P27930 398 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 SERPINB6P35237 376 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 HK3P52790 923 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 KIAA1024LP59773 190 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 POLR2LP62875 67 aaKnown RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 FANCCQ00597 558 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 RALGDSQ12967 914 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 LBRQ14739 615 aaKnown RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 ELOCQ15369 112 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 CDKN3Q16667 212 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 FAXCQ5TGI0 409 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 GUSBP11Q6P575 273 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 LVRNQ6Q4G3 990 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 IGF2-ASQ6U949 168 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 TMCO3Q6UWJ1 677 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 ARHGAP36Q6ZRI8 547 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 DPPA4Q7L190 304 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 EFL1Q7Z2Z2 1120 aaKnown RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 POLNQ7Z5Q5 900 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 LSMEM2Q8N112 164 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 FGF11Q92914 225 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 ZNF578Q96N58 590 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 DCBLD2Q96PD2 775 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 ABCG4Q9H172 646 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 TCEAL2Q9H3H9 227 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 CBX8Q9HC52 389 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 RCOR3Q9P2K3 495 aaPredicted RBP15.73■□□□□ 0.11
VPS33A-206ENST00000542310 PCDHB1Q9Y5F3 818 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 PTPRQQ9UMZ3 2332 aa15.73■□□□□ 0.11
VPS33A-206ENST00000542310 SYCE3A1L190 88 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 SERPING1P05155 500 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ELFN1P0C7U0 828 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 MYF5P13349 255 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 TSHRP16473 764 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 NFKBIAP25963 317 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ADKP55263 362 aaKnown RBP15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ZBED6P86452 979 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ZNF235Q14590 738 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ALG11Q2TAA5 492 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 SMTNL2Q2TAL5 461 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 RALGPS1Q5JS13 557 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms