RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ITIH5Q86UX2 942 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 LRRTM3Q86VH5 581 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 GABPB2Q8TAK5 448 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 DQX1Q8TE96 717 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 CLEC4CQ8WTT0 213 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 NSMCE1Q8WV22 266 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 PRCCQ92733 491 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 FATE1Q969F0 183 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 FBXO32Q969P5 355 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 TBC1D31Q96DN5 1066 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 PIWIL1Q96J94 861 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 ZFRQ96KR1 1074 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 SPATA13Q96N96 652 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 OLFM3Q96PB7 478 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 PGLYRP2Q96PD5 576 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 TSGA13Q96PP4 275 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 HERPUD2Q9BSE4 406 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CAPS2Q9BXY5 557 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 TKTL2Q9H0I9 626 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 NEUROG2Q9H2A3 272 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CDC42EP4Q9H3Q1 356 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 CENPHQ9H3R5 247 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 IL21Q9HBE4 155 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 PIGVQ9NUD9 493 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 ARHGEF38Q9NXL2 777 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 OR12D3Q9UGF7 316 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 XPO7Q9UIA9 1087 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 CYP8B1Q9UNU6 501 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 ASB3Q9Y575 518 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 PCDHGB2Q9Y5G2 931 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 ADGRG4Q8IZF6 3080 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 E7ESA3 106 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CREB3O43889 395 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 NEBLO76041 1014 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CER1O95813 267 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 FYNP06241 537 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 GNSP15586 552 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 PECAM1P16284 738 aaPredicted RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 PFKLP17858 780 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 COL8A1P27658 744 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 EPHB2P29323 1055 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 MMP13P45452 471 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 TUBP50607 506 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 PCBP4P57723 403 aaKnown RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 PPP2R2AP63151 447 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 FOXK1P85037 733 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 PDIA2Q13087 525 aaKnown RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 DUSP4Q13115 394 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 NAB1Q13506 487 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 DPYSQ14117 519 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 PRKD1Q15139 912 aaPredicted RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 TRIP4Q15650 581 aaPredicted RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 UAP1Q16222 522 aaPredicted RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 GAB4Q2WGN9 574 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 MGAT5BQ3V5L5 792 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 ARHGAP15Q53QZ3 475 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 SYPL2Q5VXT5 272 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 FBXL19Q6PCT2 694 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 LINC00523Q86TU6 105 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 SPATS2Q86XZ4 545 aaKnown RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 CMTM8Q8IZV2 173 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CCDC185Q8N715 623 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 NAT8LQ8N9F0 302 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CCNYQ8ND76 341 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 KCNE4Q8WWG9 221 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 AZIN2Q96A70 460 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CENPTQ96BT3 561 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 ALKBH8Q96BT7 664 aaKnown RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 HDAC11Q96DB2 347 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 BTN2A3PQ96KV6 586 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CYTH2Q99418 400 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 TTLL2Q9BWV7 592 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 LINC00597Q9H2U6 94 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 USP29Q9HBJ7 922 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 SAYSD1Q9NPB0 183 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 DTLQ9NZJ0 730 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 PPARGC1AQ9UBK2 798 aaKnown RBP8.49□□□□□ -1.05
CHD4-208ENST00000540960 SUSD2Q9UGT4 822 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 LGALS13Q9UHV8 139 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 WNT6Q9Y6F9 365 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 SLCO1B1Q9Y6L6 691 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
CHD4-208ENST00000540960 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 PDZD2O15018 2839 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 SYNJ2BP-COX16A0A087WUM0 186 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 A0A1B0GTW7 788 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 A0A1B0GVT2 93 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 EXOC1LA0A1B0GW35 172 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 MTMR11A4FU01 709 aa8.48□□□□□ -1.05
CHD4-208ENST00000540960 WASH4PA8MWX3 477 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms