RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CAPZA3Q96KX2 299 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PPP1R2P1Q96PQ5 205 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 TDRD1Q9BXT4 1180 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 GBA3Q9H227 469 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 VPS45Q9NRW7 570 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 SMARCAL1Q9NZC9 954 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 RNF14Q9UBS8 474 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 RPL26L1Q9UNX3 145 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 AAR2Q9Y312 384 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 GOLGA6L10A0A0M3HER8 536 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 F5H423 210 aaPredicted RBP15.59■□□□□ 0.09
DDB1-218ENST00000540784 PRLP01236 227 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 IFNB1P01574 187 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 TUBB4AP04350 444 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 PRKCGP05129 697 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 IGHV4-34P06331 123 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 RETP07949 1114 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 ITPKAP23677 461 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 MAOBP27338 520 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 MAT2AP31153 395 aaKnown RBP15.59■□□□□ 0.09
DDB1-218ENST00000540784 DPP6P42658 865 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 PAFAH1B1P43034 410 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 TNNT3P45378 269 aaPredicted RBP15.59■□□□□ 0.09
DDB1-218ENST00000540784 KCNJ1P48048 391 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 GEMP55040 296 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 GDF10P55107 478 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 LMNB2Q03252 620 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 CDK18Q07002 472 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 SGCGQ13326 291 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 TMEM52BQ4KMG9 183 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 KIAA1161Q6NSJ0 714 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 ZSCAN30Q86W11 494 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 TRIM69Q86WT6 500 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 HORMAD1Q86X24 394 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 CREG2Q8IUH2 290 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 CCDC89Q8N998 374 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 CXorf40AQ8TE69 158 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 DNASE2BQ8WZ79 361 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 PIGKQ92643 395 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 RTP4Q96DX8 246 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 SCRN2Q96FV2 425 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 C16orf45Q96MC5 204 aaPredicted RBP15.59■□□□□ 0.09
DDB1-218ENST00000540784 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 MIR1-1HGQ9H1L0 117 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 EIF2B4Q9UI10 523 aaKnown RBP15.59■□□□□ 0.09
DDB1-218ENST00000540784 GMEB2Q9UKD1 530 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 ITM2BQ9Y287 266 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 PPIL1Q9Y3C6 166 aa15.59■□□□□ 0.09
DDB1-218ENST00000540784 IGLON5A6NGN9 336 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 A8MX80 341 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 ANKRD66B4E2M5 251 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 FANCGO15287 622 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 MMP20O60882 483 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 EPOP01588 193 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 CTPS1P17812 591 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 CD27P26842 260 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 NUDT1P36639 197 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 WNT3AP56704 352 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 PPP2CBP62714 309 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 PPP2CAP67775 309 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 SEMG2Q02383 582 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 MPP3Q13368 585 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 ZNF284Q2VY69 593 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 P3H1Q32P28 736 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 SETMARQ53H47 684 aaPredicted RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 KDELC1Q6UW63 502 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 USP45Q70EL2 814 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 CYP2U1Q7Z449 544 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 SYT12Q8IV01 421 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 LPCAT1Q8NF37 534 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 KLK6Q92876 244 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 RMDN1Q96DB5 314 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 OXNAD1Q96HP4 312 aaPredicted RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 WRAP53Q9BUR4 548 aaKnown RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 MLPHQ9BV36 600 aaPredicted RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 SLC17A9Q9BYT1 436 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 ARRDC1-AS1Q9H2J1 176 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 NCDNQ9UBB6 729 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 GGT7Q9UJ14 662 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 PILRBQ9UKJ0 227 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 ZFR2Q9UPR6 939 aaKnown RBP15.58■□□□□ 0.08
DDB1-218ENST00000540784 PCDHGA5Q9Y5G8 931 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 EML5Q05BV3 1969 aa15.58■□□□□ 0.08
DDB1-218ENST00000540784 A0A1W2PPC4 97 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 GOLGA6CA6NDK9 693 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 GOLGA6BA6NDN3 693 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 C10orf142B7Z368 130 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 PSMD3O43242 534 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 SPINT1O43278 529 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 LATO43561 262 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 TM7SF2O76062 418 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 EPN2O95208 641 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 METTL18O95568 372 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 NDST3O95803 873 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 PAK4O96013 591 aaPredicted RBP15.57■□□□□ 0.08
DDB1-218ENST00000540784 GOLGA6DP0CG33 693 aa15.57■□□□□ 0.08
DDB1-218ENST00000540784 CYP2A6P11509 494 aaPredicted RBP15.57■□□□□ 0.08
DDB1-218ENST00000540784 ETS1P14921 441 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms