RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SFTPCP11686 197 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 CYP11B1P15538 503 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 GLB1P16278 677 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 GM2AP17900 193 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 CD82P27701 267 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 MMP12P39900 470 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 KIAA1024LP59773 190 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 SRP54P61011 504 aaKnown RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 B4GALNT1Q00973 533 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 MTM1Q13496 603 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 NR1D2Q14995 579 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 C16orf72Q14CZ0 275 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 LRRC14Q15048 493 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 POLD3Q15054 466 aaPredicted RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 CCDC14Q49A88 953 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 INO80DQ53TQ3 878 aaPredicted RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 C2CD6Q53TS8 623 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 LEKR1Q6ZMV7 388 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 ZNF574Q6ZN55 896 aaPredicted RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 TTC7BQ86TV6 843 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 NOP9Q86U38 636 aaKnown RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 ZSWIM9Q86XI8 627 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 GKN2Q86XP6 184 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 JAMLQ86YT9 394 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 HID1Q8IV36 788 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 HCAR2Q8TDS4 363 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 CXorf40AQ8TE69 158 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 SCG3Q8WXD2 468 aaKnown RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 CASKIN2Q8WXE0 1202 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 OR1E3Q8WZA6 343 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 GDAP1L1Q96MZ0 367 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 WRAP53Q9BUR4 548 aaKnown RBP7.37□□□□□ -1.23
YBX3-209ENST00000540747 APOOQ9BUR5 198 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 C1QTNF7Q9BXJ2 289 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 SLC12A9Q9BXP2 914 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 FGF22Q9HCT0 170 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 SIRPGQ9P1W8 387 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 GULP1Q9UBP9 304 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 LHX3Q9UBR4 397 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 RWDD2AQ9UIY3 292 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 COQ6Q9Y2Z9 468 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 RNF215Q9Y6U7 377 aa7.37□□□□□ -1.23
YBX3-209ENST00000540747 ARHGEF17Q96PE2 2063 aaPredicted RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 TMEM202A6NGA9 273 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 C2CD4BA6NLJ0 364 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 GOLGA8SH3BPF8 625 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 NUDT21O43809 227 aaKnown RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 PPFIA2O75334 1257 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 FGFR1OPO95684 399 aaKnown RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 HOXC4P09017 264 aaPredicted RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 JMJD7P0C870 316 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 TRIM23P36406 574 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PTPN9P43378 593 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 HDAC4P56524 1084 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 BPIFB4P59827 614 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 CYP4F2P78329 520 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 ATP11AP98196 1134 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 TLE1Q04724 770 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 ELP6Q0PNE2 266 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 RALGDSQ12967 914 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 INPP5AQ14642 412 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 UGP2Q16851 508 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 C15orf59Q2T9L4 293 aaPredicted RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 C14orf28Q4W4Y0 310 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 MIIPQ5JXC2 388 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 MANEAQ5SRI9 462 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 CLEC17AQ6ZS10 378 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 RYBPQ8N488 228 aaPredicted RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 CCDC185Q8N715 623 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 EMC1Q8N766 993 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 RTL3Q8N8U3 475 aaKnown RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 NETO2Q8NC67 525 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PLA2G15Q8NCC3 412 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 EPS8L1Q8TE68 723 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 USP7Q93009 1102 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PMEPA1Q969W9 287 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 NTAN1Q96AB6 310 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 TBC1D31Q96DN5 1066 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 WDR92Q96MX6 357 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 SLC25A18Q9H1K4 315 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 ADNPQ9H2P0 1102 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 SEMA6CQ9H3T2 930 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 SYNDIG1Q9H7V2 258 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PDFQ9HBH1 243 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PCDH12Q9NPG4 1184 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 ANKMY1Q9P2S6 941 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 KLQ9UEF7 1012 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 DNAI1Q9UI46 699 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 NOCTQ9UK39 431 aaKnown RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 OR1A2Q9Y585 309 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 PCDHGA3Q9Y5H0 932 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 FHOD1Q9Y613 1164 aa7.36□□□□□ -1.23
YBX3-209ENST00000540747 RP1L1Q8IWN7 2480 aaPredicted RBP7.36□□□□□ -1.23
YBX3-209ENST00000540747 CFAP69A5D8W1 941 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 GOLGA6L4A6NEF3 574 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 WASH4PA8MWX3 477 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 TNFRSF10CO14798 259 aa7.35□□□□□ -1.23
YBX3-209ENST00000540747 HGSO14964 777 aaPredicted RBP7.35□□□□□ -1.23
YBX3-209ENST00000540747 B4GAT1O43505 415 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms