RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SLC2A4P14672 509 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 DMPKQ09013 629 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 SGO1Q5FBB7 561 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 TMEM198Q66K66 360 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 AZIN2Q96A70 460 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CDH9Q9ULB4 789 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 FZD10Q9ULW2 581 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 VWA7Q9Y334 891 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 A0A0J9YVX5 310 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 FAM149AA5PLN7 773 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 UGT1A6P19224 532 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 UGT1A1P22309 533 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 UGT1A4P22310 534 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CA8P35219 290 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 UGT1A3P35503 534 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 UGT1A5P35504 534 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 GRM5P41594 1212 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 TSTA3Q13630 321 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 IKBKEQ14164 716 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 TMEM132BQ14DG7 1078 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 SMARCD1Q96GM5 515 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CCNB1IP1Q9NPC3 277 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 LAMB1P07942 1786 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 SH3PXD2BA1X283 911 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 G3V2T6 193 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 AREL1O15033 823 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 STX7O15400 261 aaKnown RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 TOP3BO95985 862 aaKnown RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 PGK2P07205 417 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 PTPN3P26045 913 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 AXLP30530 894 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 PRKG2Q13237 762 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 ACAP2Q15057 778 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 DLG2Q15700 870 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 NIPAL1Q6NVV3 410 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 CPSF7Q8N684 471 aaKnown RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 PQLC3Q8N755 202 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 FBXO30Q8TB52 745 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 MOCS1Q9NZB8 636 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 SLC22A3O75751 556 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ATG7O95352 703 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 NADKO95544 446 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 CST1P01037 141 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 KIAA0408Q6ZU52 694 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 AKAP14Q86UN6 197 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ZBTB46Q86UZ6 589 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 METTL6Q8TCB7 284 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 RAD51BO15315 384 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 THRBP10828 461 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ALOX12P18054 663 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 NCBP2-AS2Q69YL0 99 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 AMER2Q8N7J2 671 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 C18orf25Q96B23 403 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 TAMM41Q96BW9 452 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ISOC1Q96CN7 298 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 DUSP16Q9BY84 665 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 LATS2Q9NRM7 1088 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 TULP3O75386 442 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ADRA1BP35368 520 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 KRT20P35900 424 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ERMP1Q7Z2K6 904 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 B3GALNT2Q8NCR0 500 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 CINPQ9BW66 212 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 ALG2Q9H553 416 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
DNMT1-203ENST00000540357 CKMT2P17540 419 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 GTF2A2P52657 109 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PRKCQQ04759 706 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 VPS26BQ4G0F5 336 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
DNMT1-203ENST00000540357 OR8H2Q8N162 312 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms