RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CCNHP51946 323 aaPredicted RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 EPHB1P54762 984 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 SNRPD1P62314 119 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 BCL2L1Q07817 233 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 NR1H3Q13133 447 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 BMPR2Q13873 1038 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 PTPRCAPQ14761 206 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 SKIV2LQ15477 1246 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 QPCTQ16769 361 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 PTPRNQ16849 979 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 MYLK3Q32MK0 819 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 HSP90AA5PQ58FG0 334 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 RALGPS1Q5JS13 557 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 TSTD2Q5T7W7 516 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 ARMC12Q5T9G4 340 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 DPY19L3Q6ZPD9 716 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 CYS1Q717R9 158 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 EXOC3L1Q86VI1 746 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 PCDH20Q8N6Y1 951 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 PAF1Q8N7H5 531 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 ZNF366Q8N895 744 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 CHST14Q8NCH0 376 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 WFIKKN2Q8TEU8 576 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 PTCD2Q8WV60 388 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 PPM1EQ8WY54 764 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 SUSD6Q92537 303 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 CDKL2Q92772 493 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 ISG20Q96AZ6 181 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 NECTIN4Q96NY8 510 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 RANBP9Q96S59 729 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 ADGRE3Q9BY15 652 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 CEP44Q9C0F1 390 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 ZDHHC6Q9H6R6 413 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 MRM3Q9HC36 420 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 IARS2Q9NSE4 1012 aaKnown RBP6.95□□□□□ -1.3
CDH19-203ENST00000540086 TREX1Q9NSU2 369 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 ELOVL2Q9NXB9 296 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDH19-203ENST00000540086 ZFATQ9P243 1243 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 PRKAG3Q9UGI9 489 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 SLC27A6Q9Y2P4 619 aa6.95□□□□□ -1.3
CDH19-203ENST00000540086 HELZP42694 1942 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 C2orf16Q68DN1 1984 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 REV3LO60673 3130 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 CXorf51AA0A1B0GTR3 108 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 A0A1W2PPM1 405 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ANTXRLA6NF34 631 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 TRAFD1O14545 582 aaPredicted RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 AURKAO14965 403 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 LDB2O43679 373 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 FZD6O60353 706 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ATP5BP06576 529 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 ALPIP09923 528 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ALADP13716 330 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 CTPS1P17812 591 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 CA4P22748 312 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ATP5DP30049 168 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 OPRD1P41143 372 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ABCG1P45844 678 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 SOX9P48436 509 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ARCN1P48444 511 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 ARSDP51689 593 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 TMPRSS15P98073 1019 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 HTR4Q13639 388 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 FRG1Q14331 258 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 RASA2Q15283 850 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 CARD16Q5EG05 197 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 TEDDM1Q5T9Z0 273 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 PDPK2PQ6A1A2 396 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 MTSS1LQ765P7 747 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 MARK2Q7KZI7 788 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 Q7L0L9 218 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 GLT6D1Q7Z4J2 308 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 TRABD2AQ86V40 505 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 C4orf33Q8N1A6 199 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 PHTF2Q8N3S3 785 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 OR13J1Q8NGT2 312 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 GRIN3AQ8TCU5 1115 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 CHFRQ96EP1 664 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 DNAJC1Q96KC8 554 aaKnown RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 KLF6Q99612 283 aaPredicted RBP6.94□□□□□ -1.3
CDH19-203ENST00000540086 SELENOSQ9BQE4 189 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 ATP13A3Q9H7F0 1226 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 EPS15L1Q9UBC2 864 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 GGT7Q9UJ14 662 aa6.94□□□□□ -1.3
CDH19-203ENST00000540086 UNC80Q8N2C7 3258 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 IQANK1A0A1B0GTG1 560 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 TBC1D3BA6NDS4 549 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 OR51F1A6NGY5 319 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 ANKRD66B4E2M5 251 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 C2CD4DB7Z1M9 353 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 TRIM49D1C9J1S8 452 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 GOLGA8RI6L899 631 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 ARNTLO00327 626 aa6.93□□□□□ -1.3
CDH19-203ENST00000540086 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms