RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TUBB4AP04350 444 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TCP1P17987 556 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GABRG2P18507 467 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CD6P30203 668 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CASQ1P31415 396 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 DPP6P42658 865 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PAFAH1B1P43034 410 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CSNK1DP48730 415 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 MARCKSL1P49006 195 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CCNHP51946 323 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 EPHB1P54762 984 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 EIF3EP60228 445 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 AP1S1P61966 158 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 RPS14P62263 151 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 RPL6Q02878 288 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 LMNB2Q03252 620 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GBE1Q04446 702 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PPIDQ08752 370 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 AFMIDQ63HM1 303 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ITPRIPL1Q6GPH6 555 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 KIAA1211LQ6NV74 962 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ERAP2Q6P179 960 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PKN3Q6P5Z2 889 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GDPD4Q6W3E5 623 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 DPY19L3Q6ZPD9 716 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PRR23BQ6ZRT6 265 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 BBS12Q6ZW61 710 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 LPCAT2Q7L5N7 544 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GSTA5Q7RTV2 222 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 SRLQ86TD4 932 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TTC7BQ86TV6 843 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 FAM124AQ86V42 546 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 RASSF3Q86WH2 238 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CACUL1Q86Y37 369 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ARHGAP12Q8IWW6 846 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 REXO1L1PQ8IX06 675 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 HDDC3Q8N4P3 179 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PQLC3Q8N755 202 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 MDGA1Q8NFP4 955 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 OR2A12Q8NGT7 310 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 OR14C36Q8NHC7 312 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PIP4K2CQ8TBX8 421 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 HCAR2Q8TDS4 363 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 FRS2Q8WU20 508 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 GAB3Q8WWW8 586 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PTPRN2Q92932 1015 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 FATE1Q969F0 183 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 HDAC11Q96DB2 347 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ZNF641Q96N77 438 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 NSUN5Q96P11 429 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 PSKH2Q96QS6 385 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TUBGCP5Q96RT8 1024 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 NOL6Q9H6R4 1146 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 SGK2Q9HBY8 427 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 NT5MQ9NPB1 228 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ITM2CQ9NQX7 267 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ETNK2Q9NVF9 386 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 KLHL8Q9P2G9 620 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TRHDEQ9UKU6 1024 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TPX2Q9ULW0 747 aaKnown RBP6.55□□□□□ -1.36
SNHG1-212ENST00000539975 CYP8B1Q9UNU6 501 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ZNF148Q9UQR1 794 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 ZKSCAN5Q9Y2L8 839 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 DOCK6Q96HP0 2047 aa6.55□□□□□ -1.36
SNHG1-212ENST00000539975 TICRRQ7Z2Z1 1910 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3DA0A087WVF3 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3IA0A087WXS9 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3EA0A087X179 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3KA0A087X1G2 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 CFAP69A5D8W1 941 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3FA6NER0 549 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-212ENST00000539975 FAM47DPA6NHR8 397 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 MEI4A8MW99 385 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3LB9A6J9 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 J3QW42 95 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 K7ESF4 209 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 KIF2AO00139 706 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-212ENST00000539975 KCNK1O00180 336 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 ENC1O14682 589 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 MID1O15344 667 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
SNHG1-212ENST00000539975 SLC7A4O43246 635 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 FZD6O60353 706 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 LEFTY1O75610 366 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 PCDH8O95206 1070 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 FGGP02679 453 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 SERPINF2P08697 491 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TBC1D3HP0C7X1 549 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 RBP3P10745 1247 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 VAV1P15498 845 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 GNSP15586 552 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 STIP1P31948 543 aaKnown RBP6.54□□□□□ -1.36
SNHG1-212ENST00000539975 CXCR5P32302 372 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 TPMTP51580 245 aa6.54□□□□□ -1.36
SNHG1-212ENST00000539975 SUOXP51687 545 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms