RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CYP2R1Q6VVX0 501 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 LCA5Q86VQ0 697 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 METTL25Q8N6Q8 603 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 ALG9Q9H6U8 611 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 NMRK2Q9NPI5 230 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 ABCC13Q9NSE7 274 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MARCH4Q9P2E8 410 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CRYL1Q9Y2S2 319 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 GIT1Q9Y2X7 761 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PTGDR2Q9Y5Y4 395 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PPP6CO00743 305 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 FGF10O15520 208 aaPredicted RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 SLC4A1P02730 911 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 RPL9P32969 192 aaKnown RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 NME5P56597 212 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 PFKPQ01813 784 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 FASTKQ14296 549 aaKnown RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 ZNF354CQ86Y25 554 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 RTL3Q8N8U3 475 aaKnown RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 PIP4K2CQ8TBX8 421 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 FAM110BQ8TC76 370 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 HMCESQ96FZ2 354 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 SMOC2Q9H3U7 446 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 CACNA2D2Q9NY47 1150 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 PRORSD1PA6NEY8 169 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 TNFRSF10BO14763 440 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 UBDO15205 165 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 TFAP2AP05549 437 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 ADSLP30566 484 aaPredicted RBP12.03□□□□□ -0.48
CPNE8-203ENST00000538596 ETFBP38117 255 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 CDH13P55290 713 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 DNAJB13P59910 316 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 ALFQ53S48 1182 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 REP15Q6BDI9 236 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 ZFP1Q6P2D0 407 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 RSPH1Q8WYR4 309 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 C3orf30Q96M34 536 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 TRPM7Q96QT4 1865 aa12.03□□□□□ -0.48
CPNE8-203ENST00000538596 LRRC14BA6NHZ5 514 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 C9JVG2 144 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 PSMD12O00232 456 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 TRIM38O00635 465 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 B4GALT3O60512 393 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 LTA4HP09960 611 aaKnown RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 NELFEP18615 380 aaKnown RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 CYP2C18P33260 490 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 SERPINH1P50454 418 aaKnown RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 LRP8Q14114 963 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 RFTN1Q14699 578 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 AFMIDQ63HM1 303 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 AP1ARQ63HQ0 302 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 CHSY3Q70JA7 882 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 CIR1Q86X95 450 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 SPATA2LQ8IUW3 424 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 ARHGAP18Q8N392 663 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 LZTR1Q8N653 840 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 OR52K2Q8NGK3 314 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 LRTOMTQ8WZ04 291 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 NCSTNQ92542 709 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 HDAC10Q969S8 669 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 SLC45A3Q96JT2 553 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 PRPF18Q99633 342 aaKnown RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 MRM3Q9HC36 420 aaKnown RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 ABI2Q9NYB9 513 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.02□□□□□ -0.48
CPNE8-203ENST00000538596 PTPRDP23468 1912 aa12.02□□□□□ -0.48
CPNE8-203ENST00000538596 TRPA1O75762 1119 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 SUPT7LO94864 414 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 TBX18O95935 607 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 MMP2P08253 660 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 HSPA1AP0DMV8 641 aaKnown RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 HSPA1BP0DMV9 641 aaKnown RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 LEPRP48357 1165 aaKnown RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 POLD2P49005 469 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 RBBP5Q15291 538 aaKnown RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 DDR2Q16832 855 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 CILP2Q8IUL8 1156 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 RYBPQ8N488 228 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 TRPV1Q8NER1 839 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
CPNE8-203ENST00000538596 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 GSTO2Q9H4Y5 243 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 MEAF6Q9HAF1 191 aa12.02□□□□□ -0.49
CPNE8-203ENST00000538596 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms