RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KAT5Q92993 513 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 TBCDQ9BTW9 1192 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 HTATIP2Q9BUP3 242 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 KCNN2Q9H2S1 579 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 KAT8Q9H7Z6 458 aaKnown RBP6.96□□□□□ -1.3
SORT1-209ENST00000538502 MARCH7Q9H992 704 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 CCDC177Q9NQR7 707 aaPredicted RBP6.96□□□□□ -1.3
SORT1-209ENST00000538502 MAN1C1Q9NR34 630 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 TOR4AQ9NXH8 423 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 DOLKQ9UPQ8 538 aa6.96□□□□□ -1.3
SORT1-209ENST00000538502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
SORT1-209ENST00000538502 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 C17orf102A2RUQ5 167 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 SLC30A4O14863 429 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ATXN8OSP0DMR3 200 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ERVK-10P10266 1014 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 FGFR1P11362 822 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 MAPK8P45983 427 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 DLG1Q12959 904 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TCEA2Q15560 299 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 NFE2Q16621 373 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 AMIGO2Q86SJ2 522 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ILDR1Q86SU0 546 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 GATAD2AQ86YP4 633 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 C10orf107Q8IVU9 208 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RBM12BQ8IXT5 1001 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 CLHC1Q8NHS4 586 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 C9orf43Q8TAL5 461 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 C15orf40Q8WUR7 153 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TRIT1Q9H3H1 467 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 POPDC2Q9HBU9 364 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TMEM9Q9P0T7 183 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RCOR3Q9P2K3 495 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 MGAT4AQ9UM21 535 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TAF6LQ9Y6J9 622 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ZNF99A8MXY4 864 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 STX16-NPEPL1H3BU86 382 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 STX16O14662 325 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 NKRFO15226 690 aaKnown RBP eCLIP6.95□□□□□ -1.3
SORT1-209ENST00000538502 IFNA16P05015 189 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ACO1P21399 889 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 SLC18A1P54219 525 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 CCNIQ14094 377 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TMEM132BQ14DG7 1078 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RFTN2Q52LD8 501 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 PIK3R6Q5UE93 754 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 GPALPP1Q8IXQ4 340 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 SPAG16Q8N0X2 631 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PTGR2Q8N8N7 351 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 LENG9Q96B70 501 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 CRELD1Q96HD1 420 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ZNF668Q96K58 619 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 NODALQ96S42 347 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 FAM124BQ9H5Z6 455 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 C12orf4Q9NQ89 552 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 SNX15Q9NRS6 342 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 DISP2A7MBM2 1401 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 HIST1H2ABP04908 130 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 CCNB1P14635 433 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 NOS2P35228 1153 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RAB27AP51159 221 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PLEKHG6Q3KR16 790 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ZBED5Q49AG3 693 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 HECTD3Q5T447 861 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 HIST3H2AQ7L7L0 130 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TMEM86AQ8N2M4 240 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RBM15BQ8NDT2 890 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 HIST1H2ACQ93077 130 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 MED8Q96G25 268 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 C12orf66Q96MD2 445 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RNF157Q96PX1 679 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 PSME2Q9UL46 239 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 GIT1Q9Y2X7 761 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PCDHB7Q9Y5E2 793 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 GAKO14976 1311 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 SNAP23O00161 211 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 NDUFS2O75306 463 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 FADS2O95864 444 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 C9P02748 559 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TYMPP19971 482 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 NAGLUP54802 743 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 LSM3P62310 102 aaKnown RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 PHC1P78364 1004 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 RHAGQ02094 409 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 MVKQ03426 396 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 GALNT3Q14435 633 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PDIA6Q15084 440 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 FBXO47Q5MNV8 452 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ZYG11AQ6WRX3 759 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 PLCZ1Q86YW0 608 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 LNX1Q8TBB1 728 aaPredicted RBP6.95□□□□□ -1.3
SORT1-209ENST00000538502 SELENOMQ8WWX9 145 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 FNDC11Q9BVV2 318 aa6.95□□□□□ -1.3
SORT1-209ENST00000538502 TRPS1Q9UHF7 1281 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms