RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CNTNAP1P78357 1384 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DHRS12A0PJE2 317 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF99A8MXY4 864 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SLCO1B7G3V0H7 640 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ANGPT2O15123 496 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 B4GAT1O43505 415 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 EDIL3O43854 480 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 H2AFYO75367 372 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CDK14O94921 469 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CHRNA1P02708 482 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PHKG2P15735 406 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ELK4P28324 431 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 UGT2B10P36537 528 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC12A2P55011 1212 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 INCA1Q0VD86 236 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 DPYSL3Q14195 570 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 STARD3Q14849 445 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PLEKHG6Q3KR16 790 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ADPRMQ3LIE5 342 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 Q5BKY6 102 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SEL1L3Q68CR1 1132 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 CREB3L2Q70SY1 520 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 R3HCC1LQ7Z5L2 792 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TLK2Q86UE8 772 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 IFNL2Q8IZJ0 200 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PCDH20Q8N6Y1 951 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PJA1Q8NG27 643 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 VANGL1Q8TAA9 524 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ZFAND1Q8TCF1 268 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 RNF170Q96K19 258 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 B3GALT6Q96L58 329 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 KREMEN1Q96MU8 473 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 SH2D3AQ9BRG2 576 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 VAT1LQ9HCJ6 419 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM105AQ9NUU6 356 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 KLHL11Q9NVR0 708 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 ANAPC2Q9UJX6 822 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 EMCNQ9ULC0 261 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 PMF1-BGLAPU3KQ54 211 aa8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
SRGAP1-202ENST00000537556 TCAF2A6NFQ2 919 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 AGAP5A6NIR3 686 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 KPNA7A9QM74 516 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 H0Y858 1186 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TLR3O15455 904 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SCO1O75880 301 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SNX4O95219 450 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PRKCBP05771 671 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 KRT19P08727 400 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 IFI30P13284 250 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TRIM23P36406 574 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 GCLMP48507 274 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 RGS7P49802 495 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 BCAMP50895 628 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TAP1Q03518 808 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MFSD13AQ14CX5 517 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM236Q5W0B7 351 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PMF1Q6P1K2 205 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 CORO6Q6QEF8 472 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 THAP5Q7Z6K1 395 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 NDNFQ8TB73 568 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC22A8Q8TCC7 542 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MAPK15Q8TD08 544 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 HSFY1Q96LI6 401 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MUS81Q96NY9 551 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PIGSQ96S52 555 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 APBA2Q99767 749 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 APOL4Q9BPW4 351 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SLIRPQ9GZT3 109 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM168Q9H0V1 697 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 ACAD9Q9H845 621 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 NTN4Q9HB63 628 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 DCP1AQ9NPI6 582 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 FANCFQ9NPI8 374 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 RGPD2P0DJD1 1756 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 SCN4AP35499 1836 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PRORSD1PA6NEY8 169 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 NEMP1O14524 444 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 PMM2O15305 246 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 EXTL3O43909 919 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MED26O95402 600 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 GOT2P00505 430 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 HLA-DRAP01903 254 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 AMHP03971 560 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 ALOX12P18054 663 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 CYP3A5P20815 502 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 CYP2C18P33260 490 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 MAGEA11P43364 429 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 GDF10P55107 478 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 GALEQ14376 348 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 TTBK2Q6IQ55 1244 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 LETMD1Q6P1Q0 360 aa8.57□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNF517Q6ZMY9 492 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms