RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KCNK1O00180 336 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 APOL1O14791 398 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 FLRT2O43155 660 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 PSTPIP1O43586 416 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TM7SF2O76062 418 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 HLA-DQB2P05538 268 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 KRT10P13645 584 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 C6P13671 934 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 CDKN2BP42772 138 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 LIG3P49916 1009 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 DSC2Q02487 901 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 ELP6Q0PNE2 266 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 FOXC1Q12948 553 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 ZBTB17Q13105 803 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TAZQ16635 292 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 KANSL1Q7Z3B3 1105 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 LRRC49Q8IUZ0 686 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 PNPLA1Q8N8W4 532 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TP53I13Q8NBR0 393 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 CCNYQ8ND76 341 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 PDCD6IPQ8WUM4 868 aaKnown RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 NSMCE1Q8WV22 266 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 ASB12Q8WXK4 309 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 SEMA3CQ99985 751 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 RBM22Q9NW64 420 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TOR4AQ9NXH8 423 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TRIM10Q9UDY6 481 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
PRKDC-206ENST00000536429 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 WDFY3Q8IZQ1 3526 aa13.25□□□□□ -0.29
PRKDC-206ENST00000536429 A0A0U1RQS6 177 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-206ENST00000536429 DFNA5O60443 496 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 JCHAINP01591 159 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 ITGAVP06756 1048 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 GM2AP17900 193 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 MX2P20592 715 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 CCNCP24863 283 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 GRK6P43250 576 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 SUOXP51687 545 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 PFN3P60673 137 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 ITKQ08881 620 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 FZD2Q14332 565 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
PRKDC-206ENST00000536429 IRF4Q15306 451 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 WSCD2Q2TBF2 565 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 KAZNQ674X7 775 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 ERAP2Q6P179 960 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 DPPA4Q7L190 304 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 VSIG1Q86XK7 387 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 CCDC13Q8IYE1 715 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 DENND6BQ8NEG7 585 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.24□□□□□ -0.29
PRKDC-206ENST00000536429 HDAC11Q96DB2 347 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 MAK16Q9BXY0 300 aaKnown RBP13.24□□□□□ -0.29
PRKDC-206ENST00000536429 CEP41Q9BYV8 373 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 UCKL1Q9NWZ5 548 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 IMPACTQ9P2X3 320 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 B4GALT6Q9UBX8 382 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 KLF15Q9UIH9 416 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 TTLL3Q9Y4R7 772 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 PCDHB9Q9Y5E1 797 aa13.24□□□□□ -0.29
PRKDC-206ENST00000536429 ACACBO00763 2458 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 FPGTO14772 594 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PJA2O43164 708 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 HYAL3O43820 417 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 SOCS5O75159 536 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PGLSO95336 258 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 CPP00450 1065 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PDHA1P08559 390 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 ATXN1LP0C7T5 689 aaKnown RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 FTH1P19P0C7X4 201 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 CCNB1P14635 433 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PECAM1P16284 738 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 RABIFP47224 123 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 VAV2P52735 878 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PPIDQ08752 370 aaKnown RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 ALG1LQ6GMV1 187 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 TIGD7Q6NT04 549 aaPredicted RBP13.23□□□□□ -0.29
PRKDC-206ENST00000536429 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 PELI3Q8N2H9 469 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 SLC25A45Q8N413 288 aa13.23□□□□□ -0.29
PRKDC-206ENST00000536429 OXR1Q8N573 874 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms