RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PRPF39Q86UA1 669 aaKnown RBP13.65□□□□□ -0.22
RPAIN-205ENST00000536255 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-205ENST00000536255 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 HTR3CQ8WXA8 447 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 SERAC1Q96JX3 654 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 PBKQ96KB5 322 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 SEMA3CQ99985 751 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 NOD2Q9HC29 1040 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 AASDHPPTQ9NRN7 309 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 KCND1Q9NSA2 647 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 DMTF1Q9Y222 760 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 SHROOM3Q8TF72 1996 aa13.65□□□□□ -0.22
RPAIN-205ENST00000536255 A0A1W2PQU0 124 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 TSPAN11A1L157 253 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 NEMP1O14524 444 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 ENC1O14682 589 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 VILLO15195 856 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 AP1G1O43747 822 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 GJB3O75712 270 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 PCDH8O95206 1070 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 PTPN3P26045 913 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 FOXK2Q01167 660 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 ZBTB17Q13105 803 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 SLC14A1Q13336 389 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 HLA-BQ31612 363 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 SETMARQ53H47 684 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-205ENST00000536255 HORMAD1Q86X24 394 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 KLHL8Q9P2G9 620 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-205ENST00000536255 TRHDEQ9UKU6 1024 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 FADS3Q9Y5Q0 445 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 SNX11Q9Y5W9 270 aa13.64□□□□□ -0.23
RPAIN-205ENST00000536255 ADAMTS9Q9P2N4 1935 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 A0A1W2PR77 199 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 CFAP69A5D8W1 941 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 UPK3BL1B0FP48 263 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 UPK3BL2E5RIL1 263 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 TRAFD1O14545 582 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 WNT9AO14904 365 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 TSPAN6O43657 245 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 CEP104O60308 925 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 KCNK5O95279 499 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 CSRP1P21291 193 aaKnown RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 KCNA4P22459 653 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 CD38P28907 300 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ABL2P42684 1182 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 C21orf59P57076 290 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 GNG11P61952 73 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 DSC2Q02487 901 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 UGP2Q16851 508 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ZNF284Q2VY69 593 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 TMEM259Q4ZIN3 620 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ARMC12Q5T9G4 340 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ITPRIPL1Q6GPH6 555 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 KIAA1161Q6NSJ0 714 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ERAP2Q6P179 960 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 NDUFAF2Q8N183 169 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 CNTD1Q8N815 330 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 PDCD6IPQ8WUM4 868 aaKnown RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 SKA1Q96BD8 255 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ECHDC3Q96DC8 303 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 FEM1CQ96JP0 617 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 TEKT5Q96M29 485 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 NAP1L3Q99457 506 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 SLC25A51Q9H1U9 297 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 IL21RQ9HBE5 538 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
RPAIN-205ENST00000536255 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 PCDHGC4Q9Y5F7 938 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 PLXNA2O75051 1894 aa13.63□□□□□ -0.23
RPAIN-205ENST00000536255 MED19A0JLT2 244 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 TTC24A2A3L6 582 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 KCNN4O15554 427 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 FGGP02679 453 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 WNT1P04628 370 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 ZNF883P0CG24 379 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 CD59P13987 128 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 TIMP2P16035 220 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PRLRP16471 622 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 RBL1P28749 1068 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 CXCR5P32302 372 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 CD86P42081 329 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 CTSKP43235 329 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 NOVA1P51513 510 aaKnown RBP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 RPS21P63220 83 aaKnown RBP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 WASHC5Q12768 1159 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 SLC14A2Q15849 920 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms