RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ENC1O14682 589 aa18■□□□□ 0.47
DDX55-204ENST00000536079 TSPAN6O43657 245 aa18■□□□□ 0.47
DDX55-204ENST00000536079 PAK4O96013 591 aaPredicted RBP18■□□□□ 0.47
DDX55-204ENST00000536079 ENGP17813 658 aa18■□□□□ 0.47
DDX55-204ENST00000536079 GM2AP17900 193 aa18■□□□□ 0.47
DDX55-204ENST00000536079 MMP12P39900 470 aa18■□□□□ 0.47
DDX55-204ENST00000536079 CLDN2P57739 230 aa18■□□□□ 0.47
DDX55-204ENST00000536079 EIF3EP60228 445 aaKnown RBP18■□□□□ 0.47
DDX55-204ENST00000536079 RPS21P63220 83 aaKnown RBP18■□□□□ 0.47
DDX55-204ENST00000536079 XRCC4Q13426 336 aa18■□□□□ 0.47
DDX55-204ENST00000536079 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
DDX55-204ENST00000536079 ZNF567Q8N184 647 aa18■□□□□ 0.47
DDX55-204ENST00000536079 SLC35F6Q8N357 371 aa18■□□□□ 0.47
DDX55-204ENST00000536079 SPATA22Q8NHS9 363 aa18■□□□□ 0.47
DDX55-204ENST00000536079 CEP76Q8TAP6 659 aa18■□□□□ 0.47
DDX55-204ENST00000536079 HTR3CQ8WXA8 447 aa18■□□□□ 0.47
DDX55-204ENST00000536079 ATG4AQ8WYN0 398 aa18■□□□□ 0.47
DDX55-204ENST00000536079 TADA1Q96BN2 335 aa18■□□□□ 0.47
DDX55-204ENST00000536079 TEKT5Q96M29 485 aa18■□□□□ 0.47
DDX55-204ENST00000536079 C1QTNF2Q9BXJ5 285 aa18■□□□□ 0.47
DDX55-204ENST00000536079 USP29Q9HBJ7 922 aa18■□□□□ 0.47
DDX55-204ENST00000536079 GLOD4Q9HC38 313 aa18■□□□□ 0.47
DDX55-204ENST00000536079 CHKBQ9Y259 395 aa18■□□□□ 0.47
DDX55-204ENST00000536079 PCDH15Q96QU1 1955 aa18■□□□□ 0.47
DDX55-204ENST00000536079 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 H0Y8X5 98 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 NEMP1O14524 444 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 SOCS5O75159 536 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 NEBLO76041 1014 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 MT-CYBP00156 380 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 CPP00450 1065 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 ALPIP09923 528 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 RBP3P10745 1247 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 GNSP15586 552 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 CTPS1P17812 591 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 XPAP23025 273 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 CXCR5P32302 372 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 CETN2P41208 172 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 DPP6P42658 865 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 FAM193AP78312 1265 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 GRIK2Q13002 908 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 SIX1Q15475 284 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 KIF19Q2TAC6 998 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 AASDHQ4L235 1098 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 ZNF569Q5MCW4 686 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 KIAA1161Q6NSJ0 714 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 SLC13A5Q86YT5 568 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 C12orf50Q8NA57 414 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 TMEM145Q8NBT3 493 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 SPOCK2Q92563 424 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 IMP4Q96G21 291 aaKnown RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 KLF6Q99612 283 aaPredicted RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 GORASP1Q9BQQ3 440 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 EDEM2Q9BV94 578 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 TDRD1Q9BXT4 1180 aaKnown RBP17.99■□□□□ 0.47
DDX55-204ENST00000536079 SLC17A9Q9BYT1 436 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 IL21RQ9HBE5 538 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 AASDHPPTQ9NRN7 309 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 B4GALT6Q9UBX8 382 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 SUSD2Q9UGT4 822 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
DDX55-204ENST00000536079 ANKRD36A6QL64 1941 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 RALGAPA1Q6GYQ0 2036 aa17.99■□□□□ 0.47
DDX55-204ENST00000536079 GOLGA8CPA6NN73 597 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 ZSCAN12O43309 604 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 NFKB1P19838 968 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 LIG3P49916 1009 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 RACK1P63244 317 aaKnown RBP17.98■□□□□ 0.47
DDX55-204ENST00000536079 SETMARQ53H47 684 aaPredicted RBP17.98■□□□□ 0.47
DDX55-204ENST00000536079 ARMC12Q5T9G4 340 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 SEL1L2Q5TEA6 688 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 NAPEPLDQ6IQ20 393 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 DARS2Q6PI48 645 aaKnown RBP17.98■□□□□ 0.47
DDX55-204ENST00000536079 GCNT7Q6ZNI0 430 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 DPPA4Q7L190 304 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 TSPAN33Q86UF1 283 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
DDX55-204ENST00000536079 BMFQ96LC9 184 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 NUSAP1Q9BXS6 441 aaKnown RBP17.98■□□□□ 0.47
DDX55-204ENST00000536079 SLC25A51Q9H1U9 297 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 UBP1Q9NZI7 540 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 ANKRD6Q9Y2G4 727 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 SNX11Q9Y5W9 270 aa17.98■□□□□ 0.47
DDX55-204ENST00000536079 NPIPB15A6NHN6 443 aaPredicted RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 ARHGAP33O14559 1287 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 ATP1A1P05023 1023 aaKnown RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 C6P13671 934 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 LHCGRP22888 699 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 CES1P23141 567 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 SUOXP51687 545 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 AFF3P51826 1226 aaKnown RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 PRAMEF14Q5SWL7 426 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 LIPIQ6XZB0 460 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 RFLNAQ6ZTI6 216 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 PID1Q7Z2X4 250 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 KDELC2Q7Z4H8 507 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 SPATS2Q86XZ4 545 aaKnown RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 C17orf53Q8N3J3 647 aaPredicted RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 SLC35B2Q8TB61 432 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms