RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FRG1Q14331 258 aaKnown RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 CES3Q6UWW8 571 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 SFTPA1Q8IWL2 248 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 EPS8L3Q8TE67 593 aaKnown RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 PTPRN2Q92932 1015 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 MFSD3Q96ES6 412 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 CENPHQ9H3R5 247 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 SUV39H2Q9H5I1 410 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 PPANQ9NQ55 473 aaKnown RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 MOCS1Q9NZB8 636 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 THAP10Q9P2Z0 257 aaPredicted RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 STARD13Q9Y3M8 1113 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 PIAS3Q9Y6X2 628 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 EYSQ5T1H1 3165 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 POC1B-GALNT4F8VUJ3 575 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 CRTAMO95727 393 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 ASGR2P07307 311 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 NMBRP28336 390 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 QPCTQ16769 361 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 HNRNPA1L2Q32P51 320 aaKnown RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 KBTBD12Q3ZCT8 623 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 ZNF449Q6P9G9 518 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 CHST14Q8NCH0 376 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 CDKL2Q92772 493 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 LRIG1Q96JA1 1093 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 FCRL3Q96P31 734 aaPredicted RBP23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 OSBPL1AQ9BXW6 950 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 HACD3Q9P035 362 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 IL36AQ9UHA7 158 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 SLC24A2Q9UI40 661 aa23.06■■□□□ 1.28
RBFOX1-206ENST00000535565 NPC1O15118 1278 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 PAPSS2O95340 614 aaPredicted RBP23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 SLCO1A2P46721 670 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 TRMT10BQ6PF06 316 aaKnown RBP23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 GDPD4Q6W3E5 623 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 NDUFAF2Q8N183 169 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 RIBC1Q8N443 379 aaPredicted RBP23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 ZNF366Q8N895 744 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 GRIN3AQ8TCU5 1115 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 PIH1D2Q8WWB5 315 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 CERS2Q96G23 380 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 SRPK1Q96SB4 655 aaKnown RBP23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 TMEM245Q9H330 911 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 HEBP1Q9NRV9 189 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 VPS18Q9P253 973 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 IKBKGQ9Y6K9 419 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 MYO10Q9HD67 2058 aa23.05■■□□□ 1.28
RBFOX1-206ENST00000535565 ZCWPW2A0A1B0GU75 182 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 CCDC78A2IDD5 438 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 CDH16O75309 829 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 UGT2B4P06133 528 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 PIRTP0C851 137 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 TSTD2Q5T7W7 516 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 GLT6D1Q7Z4J2 308 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 CTAGE3PQ8IX95 158 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 PEX13Q92968 403 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 ECHDC3Q96DC8 303 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 ZNF778Q96MU6 729 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 TMBIM4Q9HC24 238 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 FBRSL1Q9HCM7 1045 aaKnown RBP23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 SUN2Q9UH99 717 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 PHTF1Q9UMS5 762 aa23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 TCF20Q9UGU0 1960 aaKnown RBP23.04■■□□□ 1.28
RBFOX1-206ENST00000535565 MROH6A6NGR9 719 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 FAM159BA6NKW6 160 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 GOLGA8KD6RF30 607 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 SYF2O95926 243 aaKnown RBP23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 PRKCGP05129 697 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 HNRNPLP14866 589 aaKnown RBP eCLIP23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 GLULP15104 373 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 IL9P15248 144 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 SLC8A1P32418 973 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 MSH2P43246 934 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 PDE1BQ01064 536 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 MGAT5Q09328 741 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 TDGQ13569 410 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 EFTUD2Q15029 972 aaKnown RBP eCLIP23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 TAF1AQ15573 450 aaPredicted RBP23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 EGFLAMQ63HQ2 1017 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 PDPK2PQ6A1A2 396 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 LRRC6Q86X45 466 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 TDRPQ86YL5 185 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 MSANTD3Q96H12 275 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 PAFAH2Q99487 392 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 TRABDQ9H4I3 376 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 MTG2Q9H4K7 406 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 MAGEE1Q9HCI5 957 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 TREX1Q9NSU2 369 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 WASF2Q9Y6W5 498 aa23.03■■□□□ 1.28
RBFOX1-206ENST00000535565 C2orf81A6NN90 581 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 RGS16O15492 202 aaPredicted RBP23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 LDB2O43679 373 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 LEFTY1O75610 366 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 SRFP11831 508 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 HLA-EP13747 358 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 IL12RB1P42701 662 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 POLR2LP62875 67 aaKnown RBP23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 TFF2Q03403 129 aa23.02■■□□□ 1.28
RBFOX1-206ENST00000535565 NAB1Q13506 487 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms