RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 NRCAMQ92823 1304 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CCDC189A1A4V9 331 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 NTSP30990 170 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 NEK3P51956 506 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CDK16Q00536 496 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 COL9A2Q14055 689 aaPredicted RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 ANKS1BQ7Z6G8 1248 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TOR3AQ9H497 397 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 A0A1W2PRG6 482 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CCL16O15467 120 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 LIASO43766 372 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ZNF432O94892 652 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 RPL38P63173 70 aaKnown RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 DGUOKQ16854 277 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 SMU1Q2TAY7 513 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CXorf57Q6NSI4 855 aaKnown RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 NIPA1Q7RTP0 329 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 FAM129CQ86XR2 697 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TMPRSS6Q8IU80 811 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 OFCC1Q8IZS5 231 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 NKIRAS2Q9NYR9 191 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 JAK1P23458 1154 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 RPL22P35268 128 aaKnown RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 IRF8Q02556 426 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 FBXO48Q5FWF7 155 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 PCID2Q5JVF3 399 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 SVOPQ8N4V2 548 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CDYL2Q8N8U2 506 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ZNF563Q8TA94 476 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 RERGQ96A58 199 aaPredicted RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 REPS1Q96D71 796 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ART5Q96L15 291 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 DHRS1Q96LJ7 313 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 RRN3Q9NYV6 651 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ATP6AP2A0A1C7CYW4 349 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 SLC28A2O43868 658 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TPST2O60704 377 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ATP6AP2O75787 350 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 RGS20O76081 388 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TOP3BO95985 862 aaKnown RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 LTA4HP09960 611 aaKnown RBP12.69□□□□□ -0.38
SPG11-203ENST00000535302 GRIA4P48058 902 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 MYBPC2Q14324 1141 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 CLIP4Q8N3C7 705 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 MBOAT7Q96N66 472 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 GPER1Q99527 375 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 NRP2O60462 931 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 PSMD7P51665 324 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 TAS2R40P59535 323 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 GNA13Q14344 377 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 MED22Q15528 200 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 ZNF613Q6PF04 617 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 POC5Q8NA72 575 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 KLHL32Q96NJ5 620 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 KCNMB3Q9NPA1 279 aa12.69□□□□□ -0.38
SPG11-203ENST00000535302 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 H3BSH0 61 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 OPLAHO14841 1288 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 NAGLUP54802 743 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ADARP55265 1226 aaKnown RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 RHBDL3P58872 404 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 XKR6Q5GH73 641 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 STXBP5Q5T5C0 1151 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 FAM9CQ8IZT9 166 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 LZTR1Q8N653 840 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 KPNA4O00629 521 aaPredicted RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 WNT7AO00755 349 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 NAXEQ8NCW5 288 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 TRPV3Q8NET8 790 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 OR4A15Q8NGL6 344 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 PGM3O95394 542 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ERBB2P04626 1255 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 AENQ8WTP8 325 aaKnown RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 KBTBD7Q8WVZ9 684 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 DEFB118Q96PH6 123 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 MYRFQ9Y2G1 1151 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 PDE9AO76083 593 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms