RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 FAM87AP0C7U9 286 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 NME1P15531 152 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ITIH2P19823 946 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 CR2P20023 1033 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PSMA2P25787 234 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PBX1P40424 430 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF165P49910 485 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TLE1Q04724 770 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 RAD51Q06609 339 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 EIF2B5Q13144 721 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 CLN3Q13286 438 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 SGCGQ13326 291 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 KIF26BQ2KJY2 2108 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TMEM52BQ4KMG9 183 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 FIGNQ5HY92 759 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 XKR5Q6UX68 686 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PTAR1Q7Z6K3 402 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PSTKQ8IV42 348 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ARHGAP12Q8IWW6 846 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 RYBPQ8N488 228 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TP53I13Q8NBR0 393 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 EXTL1Q92935 676 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ARHGEF26Q96DR7 871 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 GDAP1L1Q96MZ0 367 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 KCTD15Q96SI1 283 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 SNRNP25Q9BV90 132 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TRIM7Q9C029 511 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 SLC39A8Q9C0K1 460 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ISCUQ9H1K1 167 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 GPATCH2LQ9NWQ4 482 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 DONSONQ9NYP3 566 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PNMA8BQ9ULN7 279 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 AP4E1Q9UPM8 1137 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 CSNK1G3Q9Y6M4 447 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 CREBBPQ92793 2442 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 FLNCQ14315 2725 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 LRRK2Q5S007 2527 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 K7ESM1 405 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 TOR1BO14657 336 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 FPGTO14772 594 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 ITGB6P18564 788 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 MIPP30301 263 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 IGFALSP35858 605 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 CSNK1DP48730 415 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 HCAR3P49019 387 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 PAPOLAP51003 745 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 SUOXP51687 545 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 TPI1P60174 286 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 RHOAP61586 193 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 YPEL5P62699 121 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 SKOR1P84550 965 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 PDE1CQ14123 709 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 GRM3Q14832 879 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 AGERQ15109 404 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 ASIC2Q16515 512 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 ISXQ2M1V0 245 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 FILIP1LQ4L180 1135 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF542PQ5EBM4 170 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 IGF2-ASQ6U949 168 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 PARGQ86W56 976 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 MAPK15Q8TD08 544 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 ATXN7L3BQ96GX2 97 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 APOLD1Q96LR9 279 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 TBATAQ96M53 351 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 DUSP23Q9BVJ7 150 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 SUV39H2Q9H5I1 410 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 USP29Q9HBJ7 922 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 MBNL1Q9NR56 388 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 DNAJC28Q9NX36 388 aa10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 UBA2Q9UBT2 640 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 TLN1Q9Y490 2541 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-203ENST00000534830 A0A1W2PNU3 283 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 NEMP2A6NFY4 417 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ARHGAP42A6NI28 874 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 EEF2KO00418 725 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 NEMP1O14524 444 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 TPP1O14773 563 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 EFSO43281 561 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 MMP20O60882 483 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 LRCH4O75427 683 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 NEBLO76041 1014 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 TM7SF2O76062 418 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 PIGNO95427 931 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 GP1BAP07359 652 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 SFTPCP11686 197 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 SKILP12757 684 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 DESP17661 470 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ERCC2P18074 760 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 PCK1P35558 622 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 RGRP47804 291 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF135P52742 658 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 INHBCP55103 352 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms