RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 C1orf50Q9BV19 199 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 VRTNQ9H8Y1 702 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 SEMA4BQ9NPR2 832 aaPredicted RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 CASS4Q9NQ75 786 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 CPA4Q9UI42 421 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 ANKRD6Q9Y2G4 727 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 TIMM22Q9Y584 194 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 NFKBIEO00221 500 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 EI24O14681 340 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 ACOT8O14734 319 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 MAN1A2O60476 641 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 DAB1O75553 588 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 USP2O75604 605 aaPredicted RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 KCNH1O95259 989 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 PARNO95453 639 aaKnown RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 PENKP01210 267 aaPredicted RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 CD4P01730 458 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 HMBSP08397 361 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 SBK3P0C264 359 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 BDNFP23560 247 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 NUP107P57740 925 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 ECT2LQ008S8 904 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 BFSP2Q13515 415 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 NFYCQ13952 458 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 KYAT1Q16773 422 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 SV2CQ496J9 727 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 CLEC20AQ6ZU45 233 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 LINC00523Q86TU6 105 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 BPIFB6Q8NFQ5 453 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 OR6J1Q8NGC5 347 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 CENPIQ92674 756 aaPredicted RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 TCF12Q99081 682 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 ADI1Q9BV57 179 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 DGCR6LQ9BY27 220 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 SMOXQ9NWM0 555 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 SELENONQ9NZV5 590 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 AAR2Q9Y312 384 aaKnown RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
RAG1-203ENST00000534663 NUP214P35658 2090 aaPredicted RBP6.88□□□□□ -1.31
RAG1-203ENST00000534663 COL11A1P12107 1806 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 TTC3P53804 2025 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 A8MT66 165 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 GNGT2O14610 69 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 DCLK1O15075 740 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 B4GAT1O43505 415 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 HGFP14210 728 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 ATP6V1B2P21281 511 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 EDNRBP24530 442 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 EEF1DP29692 281 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 CCR1P32246 355 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 C21orf59P57076 290 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 LILRA4P59901 499 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 ITGADQ13349 1161 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 SQLEQ14534 574 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 PTPRCAPQ14761 206 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 DCAF4L1Q3SXM0 396 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 DUS1LQ6P1R4 473 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 ZNF554Q86TJ5 538 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 CAMK1DQ8IU85 385 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 FIBCD1Q8N539 461 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 DDHD1Q8NEL9 900 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 DCPSQ96C86 337 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 SNX27Q96L92 541 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 NPY6RQ99463 290 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 NAA50Q9GZZ1 169 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 PFDN4Q9NQP4 134 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 NSMCE4AQ9NXX6 385 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 TRHDEQ9UKU6 1024 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 PAIP2BQ9ULR5 123 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 FAM50BQ9Y247 325 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 NDUFAF1Q9Y375 327 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 SUPT3HB4E1H0 165 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 H3BNH8 94 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 I6L893 689 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 FBP2O00757 339 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 MTSS1O43312 755 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 OCM2P0CE71 109 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 OCMP0CE72 109 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 RPS12P25398 132 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 NFKBIAP25963 317 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 ZNF280AP59817 542 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 GNA12Q03113 381 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 FRG1Q14331 258 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 RABL3Q5HYI8 236 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 FGD3Q5JSP0 725 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 PRAMEF19Q5SWL8 479 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 RAB44Q7Z6P3 723 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 CLEC14AQ86T13 490 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 ERI1Q8IV48 349 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 MFSD6LQ8IWD5 586 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 CHERPQ8IWX8 916 aaKnown RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 DHRSXQ8N5I4 330 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 PTGR2Q8N8N7 351 aaPredicted RBP6.87□□□□□ -1.31
RAG1-203ENST00000534663 OR2T34Q8NGX1 318 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 OR2T3Q8NH03 318 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 LPPQ93052 612 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 ISOC1Q96CN7 298 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 OSBPL2Q9H1P3 480 aa6.87□□□□□ -1.31
RAG1-203ENST00000534663 OLAHQ9NV23 265 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms